RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 KLK8O60259 260 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 GLRA3O75311 464 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 ERLIN1O75477 346 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 IGHEP01854 428 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 SERPINA6P08185 405 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 SFTPCP11686 197 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 ALOX12P18054 663 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 IL1RNP18510 177 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 ZNF10P21506 573 aaPredicted RBP13.06□□□□□ -0.32
USF1-205ENST00000473969 HNF4AP41235 474 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 PHEXP78562 749 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 TBCCQ15814 346 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 NKG7Q16617 165 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 MED27Q6P2C8 311 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 PRSS58Q8IYP2 241 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 ANKRD53Q8N9V6 530 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 OR9A4Q8NGU2 314 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 OR2W6PQ8NHA6 318 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 STT3BQ8TCJ2 826 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 REPS1Q96D71 796 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 WDR34Q96EX3 536 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 WBP1Q96G27 269 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 FAR2Q96K12 515 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 SOX17Q9H6I2 414 aaPredicted RBP13.06□□□□□ -0.32
USF1-205ENST00000473969 IPPKQ9H8X2 491 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 SLC22A11Q9NSA0 550 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 C14orf105Q9NVL8 296 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 TMEM216Q9P0N5 145 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 CTSFQ9UBX1 484 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 GRID1Q9ULK0 1009 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 G3BP2Q9UN86 482 aaKnown RBP13.06□□□□□ -0.32
USF1-205ENST00000473969 ASB1Q9Y576 335 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 PTPRQQ9UMZ3 2332 aa13.06□□□□□ -0.32
USF1-205ENST00000473969 A0A1W2PPM1 405 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 COPEO14579 308 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 FOXS1O43638 330 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 KLF7O75840 302 aaPredicted RBP13.05□□□□□ -0.32
USF1-205ENST00000473969 KLHL18O94889 574 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 SIX3O95343 332 aaPredicted RBP13.05□□□□□ -0.32
USF1-205ENST00000473969 MED26O95402 600 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 FURINP09958 794 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 ZGLP1P0C6A0 271 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 PCNAP12004 261 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 SERPINB1P30740 379 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 CASP2P42575 452 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 CCNG1P51959 295 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 RRADP55042 308 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 TGM3Q08188 693 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 IL10RAQ13651 578 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 RBBP7Q16576 425 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 TOR1AIP1Q5JTV8 583 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 MFSD4BQ5TF39 518 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 LIPJQ5W064 366 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 COX15Q7KZN9 410 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 SLC22A9Q8IVM8 553 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.05□□□□□ -0.32
USF1-205ENST00000473969 MREGQ8N565 214 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 DTWD1Q8N5C7 304 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 CCDC63Q8NA47 563 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 LSM14AQ8ND56 463 aaKnown RBP13.05□□□□□ -0.32
USF1-205ENST00000473969 NACC2Q96BF6 587 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 MOCOSQ96EN8 888 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 FER1L6-AS2Q96M78 137 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 CRB3Q9BUF7 120 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 IQCGQ9H095 443 aaKnown RBP13.05□□□□□ -0.32
USF1-205ENST00000473969 ACSS2Q9NR19 701 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 SEMA3GQ9NS98 782 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 ADGRE2Q9UHX3 823 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 PLAAQ9Y263 795 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 MRPS2Q9Y399 296 aaKnown RBP13.05□□□□□ -0.32
USF1-205ENST00000473969 NAALAD2Q9Y3Q0 740 aa13.05□□□□□ -0.32
USF1-205ENST00000473969 HEATR5BQ9P2D3 2071 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 FAM208BQ5VWN6 2430 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 SGK494L7N484 410 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 ATXN7O15265 892 aaPredicted RBP13.04□□□□□ -0.32
USF1-205ENST00000473969 UGDHO60701 494 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 CLEC3AO75596 197 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 HEXBP07686 556 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 ZNF888P0CJ79 500 aaPredicted RBP13.04□□□□□ -0.32
USF1-205ENST00000473969 KRT4P19013 534 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 IL10P22301 178 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 ATP5F1P24539 256 aaPredicted RBP13.04□□□□□ -0.32
USF1-205ENST00000473969 EMP2P54851 167 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 RAB8AP61006 207 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 CCDC153Q494R4 210 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 DEFB134Q4QY38 66 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 VWA2Q5GFL6 755 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 FAM69BQ5VUD6 431 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 GRHL2Q6ISB3 625 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 SHISA6Q6ZSJ9 500 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 MED25Q71SY5 747 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 GOLGA7Q7Z5G4 137 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 ARHGEF39Q8N4T4 335 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 TMEM102Q8N9M5 508 aaPredicted RBP13.04□□□□□ -0.32
USF1-205ENST00000473969 SRFBP1Q8NEF9 429 aaKnown RBP13.04□□□□□ -0.32
USF1-205ENST00000473969 OR51Q1Q8NH59 317 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 MZB1Q8WU39 189 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 TTC9Q92623 222 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 CCDC126Q96EE4 140 aa13.04□□□□□ -0.32
USF1-205ENST00000473969 MAGEB10Q96LZ2 347 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms