RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 NAP1L5Q96NT1 182 aaPredicted RBP1.41□□□□□ -2.18
CCDC39-203ENST00000473854 MTMR9Q96QG7 549 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 PLIN2Q99541 437 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 LZTS2Q9BRK4 669 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 PAIP1Q9H074 479 aaKnown RBP1.41□□□□□ -2.18
CCDC39-203ENST00000473854 RANBP17Q9H2T7 1088 aaKnown RBP1.41□□□□□ -2.18
CCDC39-203ENST00000473854 VAT1LQ9HCJ6 419 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 KCNMB3Q9NPA1 279 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 MYOZ2Q9NPC6 264 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 SH3GLB2Q9NR46 395 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 SAMSN1Q9NSI8 373 aaKnown RBP1.41□□□□□ -2.18
CCDC39-203ENST00000473854 INTS9Q9NV88 658 aaKnown RBP1.41□□□□□ -2.18
CCDC39-203ENST00000473854 TAB2Q9NYJ8 693 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 KCND2Q9NZV8 630 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 IFNKQ9P0W0 207 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 UBA2Q9UBT2 640 aaPredicted RBP1.41□□□□□ -2.18
CCDC39-203ENST00000473854 IKZF3Q9UKT9 509 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 TBX20Q9UMR3 447 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 ARHGAP26Q9UNA1 814 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 CAMK2AQ9UQM7 478 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 ASPMQ8IZT6 3477 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 ZFC3H1O60293 1989 aaKnown RBP1.41□□□□□ -2.18
CCDC39-203ENST00000473854 DOCK9Q9BZ29 2069 aa1.41□□□□□ -2.18
CCDC39-203ENST00000473854 ASTN1O14525 1302 aa1.4□□□□□ -2.18
CCDC39-203ENST00000473854 NUMA1Q14980 2115 aa1.4□□□□□ -2.18
CCDC39-203ENST00000473854 HIVEP2P31629 2446 aa1.4□□□□□ -2.18
CCDC39-203ENST00000473854 DOCK8Q8NF50 2099 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 ATG2BQ96BY7 2078 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 C2orf16Q68DN1 1984 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 ZNF106Q9H2Y7 1883 aaKnown RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 UQCRHLA0A096LP55 91 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 TEX13DA0A0J9YY54 714 aaPredicted RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 A0A1W2PQM1 296 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 FRMD3A2A2Y4 597 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 RSPH10B2B2RC85 870 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 EIF3CLB5ME19 914 aaKnown RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 E9PMD0 336 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 F5H6K3 240 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 EPHB6O15197 1021 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 MSH4O15457 936 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 MED24O75448 989 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 LY6G6DO95868 133 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 F9P00740 461 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 RPN1P04843 607 aaKnown RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 GYPCP04921 128 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 PTMAP06454 111 aaKnown RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 UQCRHP07919 91 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 RSPH10BP0C881 870 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 CKMT2P17540 419 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 XBP1P17861 261 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 BCL3P20749 454 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 MSNP26038 577 aaKnown RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 ABCD1P33897 745 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 HOXD13P35453 343 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 LONP1P36776 959 aaKnown RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 CCT6AP40227 531 aaKnown RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 PRPHP41219 470 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 PRCPP42785 496 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 SLC1A4P43007 532 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 HARS2P49590 506 aaKnown RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 KLK7P49862 253 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 STAT2P52630 851 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 THOP1P52888 689 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 SLC12A3P55017 1021 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 RPS18P62269 152 aaKnown RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 UBXN2AP68543 259 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 NDPQ00604 133 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 KLRC3Q07444 240 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 PTP4A2Q12974 167 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 STK4Q13043 487 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 SPP2Q13103 211 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 ITGB3BPQ13352 177 aaPredicted RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 ORC2Q13416 577 aaPredicted RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 NONOQ15233 471 aaKnown RBP eCLIP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 KRT31Q15323 416 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 GPR68Q15743 365 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 BAK1Q16611 211 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 UGCGQ16739 394 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 PRICKLE4Q2TBC4 344 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 CDONQ4KMG0 1287 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 ZCWPW2Q504Y3 356 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 RAB6CQ53S08 254 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 HERC4Q5GLZ8 1057 aaPredicted RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 CXorf66Q5JRM2 361 aaPredicted RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 HYIQ5T013 277 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 FKBP1CQ5VVH2 108 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 GALNT17Q6IS24 598 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 ACAD10Q6JQN1 1059 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 TSSK4Q6SA08 328 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 MMS22LQ6ZRQ5 1243 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 SDCCAG8Q86SQ7 713 aaPredicted RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 LRRC8AQ8IWT6 810 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 ZC3H3Q8IXZ2 948 aaKnown RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 CCAR2Q8N163 923 aaKnown RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 ABHD12Q8N2K0 398 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 GCSAMQ8N6F7 178 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 ZNF713Q8N859 430 aaPredicted RBP1.4□□□□□ -2.19
CCDC39-203ENST00000473854 TC2NQ8N9U0 490 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 TRIML1Q8N9V2 468 aa1.4□□□□□ -2.19
CCDC39-203ENST00000473854 KLHL30-AS1Q8NEE0 82 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms