RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 HCN3Q9P1Z3 774 aa17.95■□□□□ 0.46
PTCD3-210ENST00000473829 MAP4K5Q9Y4K4 846 aa17.95■□□□□ 0.46
PTCD3-210ENST00000473829 ZNF860A6NHJ4 632 aa17.94■□□□□ 0.46
PTCD3-210ENST00000473829 LRRC14BA6NHZ5 514 aa17.94■□□□□ 0.46
PTCD3-210ENST00000473829 MKRN2OSH3BPM6 223 aa17.94■□□□□ 0.46
PTCD3-210ENST00000473829 ALOX12BO75342 701 aa17.94■□□□□ 0.46
PTCD3-210ENST00000473829 RDH16O75452 317 aa17.94■□□□□ 0.46
PTCD3-210ENST00000473829 JRKO75564 520 aa17.94■□□□□ 0.46
PTCD3-210ENST00000473829 AVPR1BP47901 424 aa17.94■□□□□ 0.46
PTCD3-210ENST00000473829 C19orf57Q0VDD7 668 aa17.94■□□□□ 0.46
PTCD3-210ENST00000473829 PWP1Q13610 501 aa17.94■□□□□ 0.46
PTCD3-210ENST00000473829 ADNP2Q6IQ32 1131 aa17.94■□□□□ 0.46
PTCD3-210ENST00000473829 ADGRD1Q6QNK2 874 aa17.94■□□□□ 0.46
PTCD3-210ENST00000473829 KIRREL2Q6UWL6 708 aa17.94■□□□□ 0.46
PTCD3-210ENST00000473829 MED25Q71SY5 747 aa17.94■□□□□ 0.46
PTCD3-210ENST00000473829 LRRC70Q7Z2Q7 622 aa17.94■□□□□ 0.46
PTCD3-210ENST00000473829 TBC1D19Q8N5T2 526 aa17.94■□□□□ 0.46
PTCD3-210ENST00000473829 TMEM102Q8N9M5 508 aaPredicted RBP17.94■□□□□ 0.46
PTCD3-210ENST00000473829 SLC6A16Q9GZN6 736 aa17.94■□□□□ 0.46
PTCD3-210ENST00000473829 MKKSQ9NPJ1 570 aaPredicted RBP17.94■□□□□ 0.46
PTCD3-210ENST00000473829 SEMA3GQ9NS98 782 aa17.94■□□□□ 0.46
PTCD3-210ENST00000473829 COPG2Q9UBF2 871 aa17.94■□□□□ 0.46
PTCD3-210ENST00000473829 NAALAD2Q9Y3Q0 740 aa17.94■□□□□ 0.46
PTCD3-210ENST00000473829 SLC22A7Q9Y694 548 aa17.94■□□□□ 0.46
PTCD3-210ENST00000473829 SYCE1LA8MT33 242 aa17.93■□□□□ 0.46
PTCD3-210ENST00000473829 ESPNB1AK53 854 aa17.93■□□□□ 0.46
PTCD3-210ENST00000473829 H0YIG0 161 aa17.93■□□□□ 0.46
PTCD3-210ENST00000473829 MAP2K7O14733 419 aa17.93■□□□□ 0.46
PTCD3-210ENST00000473829 KLK8O60259 260 aa17.93■□□□□ 0.46
PTCD3-210ENST00000473829 DNAJB6O75190 326 aa17.93■□□□□ 0.46
PTCD3-210ENST00000473829 CEACAM4O75871 244 aa17.93■□□□□ 0.46
PTCD3-210ENST00000473829 KLHL18O94889 574 aa17.93■□□□□ 0.46
PTCD3-210ENST00000473829 SNRPAP09012 282 aaKnown RBP17.93■□□□□ 0.46
PTCD3-210ENST00000473829 ZNF888P0CJ79 500 aaPredicted RBP17.93■□□□□ 0.46
PTCD3-210ENST00000473829 DOC2AQ14183 400 aa17.93■□□□□ 0.46
PTCD3-210ENST00000473829 SETDB1Q15047 1291 aa17.93■□□□□ 0.46
PTCD3-210ENST00000473829 LACTB2Q53H82 288 aaPredicted RBP17.93■□□□□ 0.46
PTCD3-210ENST00000473829 DCAF10Q5QP82 559 aa17.93■□□□□ 0.46
PTCD3-210ENST00000473829 KLC3Q6P597 504 aa17.93■□□□□ 0.46
PTCD3-210ENST00000473829 VN1R5Q7Z5H4 357 aa17.93■□□□□ 0.46
PTCD3-210ENST00000473829 PTRH1Q86Y79 214 aaKnown RBP17.93■□□□□ 0.46
PTCD3-210ENST00000473829 WDR34Q96EX3 536 aa17.93■□□□□ 0.46
PTCD3-210ENST00000473829 IP6K3Q96PC2 410 aa17.93■□□□□ 0.46
PTCD3-210ENST00000473829 TGIF2Q9GZN2 237 aa17.93■□□□□ 0.46
PTCD3-210ENST00000473829 EHD1Q9H4M9 534 aa17.93■□□□□ 0.46
PTCD3-210ENST00000473829 KLHL31Q9H511 634 aa17.93■□□□□ 0.46
PTCD3-210ENST00000473829 ANKHQ9HCJ1 492 aa17.93■□□□□ 0.46
PTCD3-210ENST00000473829 C14orf105Q9NVL8 296 aa17.93■□□□□ 0.46
PTCD3-210ENST00000473829 C3orf18Q9UK00 162 aa17.93■□□□□ 0.46
PTCD3-210ENST00000473829 FBXL4Q9UKA2 621 aa17.93■□□□□ 0.46
PTCD3-210ENST00000473829 ZNF462Q96JM2 2506 aa17.93■□□□□ 0.46
PTCD3-210ENST00000473829 CCDC189A1A4V9 331 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 A6NL46 340 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 IDSB3KWA1 339 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 B8ZZF3 427 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 K7EPI3 171 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 AGPSO00116 658 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 PEX12O00623 359 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 CLGNO14967 610 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 GALR3O60755 368 aaPredicted RBP17.92■□□□□ 0.46
PTCD3-210ENST00000473829 BMP10O95393 424 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 TBX6O95947 436 aaPredicted RBP17.92■□□□□ 0.46
PTCD3-210ENST00000473829 SHBGP04278 402 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 HNF4AP41235 474 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 RRADP55042 308 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 RGS1Q08116 209 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 RAPSNQ13702 412 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 RBBP7Q16576 425 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 PFKFB4Q16877 469 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 DEFB134Q4QY38 66 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 XKR6Q5GH73 641 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 TCTN3Q6NUS6 607 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 TMIGD1Q6UXZ0 262 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 TRPV3Q8NET8 790 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 FDCSPQ8NFU4 85 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 OR5T3Q8NGG3 340 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 UTP15Q8TED0 518 aaKnown RBP17.92■□□□□ 0.46
PTCD3-210ENST00000473829 C8orf44Q96CB5 159 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 PTCD3Q96EY7 689 aaKnown RBP17.92■□□□□ 0.46
PTCD3-210ENST00000473829 NUDT9Q9BW91 350 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 CAPS2Q9BXY5 557 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 MLXIPLQ9NP71 852 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 CPSF2Q9P2I0 782 aaKnown RBP17.92■□□□□ 0.46
PTCD3-210ENST00000473829 XPR1Q9UBH6 696 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 OPTCQ9UBM4 332 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 ZNF490Q9ULM2 529 aaPredicted RBP17.92■□□□□ 0.46
PTCD3-210ENST00000473829 SPTA1P02549 2419 aa17.92■□□□□ 0.46
PTCD3-210ENST00000473829 H2AFYO75367 372 aaKnown RBP17.91■□□□□ 0.46
PTCD3-210ENST00000473829 SIX3O95343 332 aaPredicted RBP17.91■□□□□ 0.46
PTCD3-210ENST00000473829 SMIM10L1P0DMW3 83 aa17.91■□□□□ 0.46
PTCD3-210ENST00000473829 GFAPP14136 432 aa17.91■□□□□ 0.46
PTCD3-210ENST00000473829 ALOX12P18054 663 aa17.91■□□□□ 0.46
PTCD3-210ENST00000473829 HNRNPH1P31943 449 aaKnown RBP17.91■□□□□ 0.46
PTCD3-210ENST00000473829 RAB8AP61006 207 aa17.91■□□□□ 0.46
PTCD3-210ENST00000473829 VSNL1P62760 191 aa17.91■□□□□ 0.46
PTCD3-210ENST00000473829 OLR1P78380 273 aa17.91■□□□□ 0.46
PTCD3-210ENST00000473829 CHIT1Q13231 466 aa17.91■□□□□ 0.46
PTCD3-210ENST00000473829 E2F2Q14209 437 aa17.91■□□□□ 0.46
PTCD3-210ENST00000473829 NAA30Q147X3 362 aaPredicted RBP17.91■□□□□ 0.46
PTCD3-210ENST00000473829 HERC3Q15034 1050 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms