RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 C9orf43Q8TAL5 461 aaPredicted RBP9.75□□□□□ -0.85
APTX-216ENST00000472896 ASB15Q8WXK1 588 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 NTAN1Q96AB6 310 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 ZNF578Q96N58 590 aaPredicted RBP9.75□□□□□ -0.85
APTX-216ENST00000472896 TRNT1Q96Q11 434 aaKnown RBP9.75□□□□□ -0.85
APTX-216ENST00000472896 HHIPQ96QV1 700 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 FCRL5Q96RD9 977 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 CDT1Q9H211 546 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 DPEP3Q9H4B8 488 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 ALG9Q9H6U8 611 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 CARS2Q9HA77 564 aaKnown RBP9.75□□□□□ -0.85
APTX-216ENST00000472896 POPDC3Q9HBV1 291 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 TIGARQ9NQ88 270 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 PRDM8Q9NQV8 689 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 GKN1Q9NS71 199 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 OLA1Q9NTK5 396 aaKnown RBP9.75□□□□□ -0.85
APTX-216ENST00000472896 DCAF13Q9NV06 445 aaKnown RBP9.75□□□□□ -0.85
APTX-216ENST00000472896 ING3Q9NXR8 418 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 MAT2BQ9NZL9 334 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.75□□□□□ -0.85
APTX-216ENST00000472896 GIMAP2Q9UG22 337 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 TMPRSS11EQ9UL52 423 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 MAFFQ9ULX9 164 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 INVSQ9Y283 1065 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 TIMM13Q9Y5L4 95 aaPredicted RBP9.75□□□□□ -0.85
APTX-216ENST00000472896 ABCA7Q8IZY2 2146 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 AKAP13Q12802 2813 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 ELOVL7A1L3X0 281 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 TMEM8BA6NDV4 472 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 E9PQ18 207 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 CXCR6O00574 342 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 CDX4O14627 284 aaPredicted RBP9.75□□□□□ -0.85
APTX-216ENST00000472896 SLC7A4O43246 635 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 SH3BP5O60239 455 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 EGFP01133 1207 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 CXCL8P10145 99 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 UROSP10746 265 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 CYP2A6P11509 494 aaPredicted RBP9.75□□□□□ -0.85
APTX-216ENST00000472896 NCF1P14598 390 aaPredicted RBP9.75□□□□□ -0.85
APTX-216ENST00000472896 KCNE1P15382 129 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 PFKLP17858 780 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 TSPAN8P19075 237 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 KRT20P35900 424 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 SLAMF1Q13291 335 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 NKG7Q16617 165 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 SYT16Q17RD7 645 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 TMEM196Q5HYL7 178 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 GPR158Q5T848 1215 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 SDE2Q6IQ49 451 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 DNAJB7Q7Z6W7 309 aaPredicted RBP9.75□□□□□ -0.85
APTX-216ENST00000472896 TMEM179BQ7Z7N9 219 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 OSTM1Q86WC4 334 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 TTC9BQ8N6N2 239 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 CDYL2Q8N8U2 506 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 C12orf29Q8N999 325 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 TTC29Q8NA56 475 aaPredicted RBP9.75□□□□□ -0.85
APTX-216ENST00000472896 DNAJB8Q8NHS0 232 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 BRSK1Q8TDC3 778 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 ZCCHC14Q8WYQ9 949 aaKnown RBP9.75□□□□□ -0.85
APTX-216ENST00000472896 NT5C3BQ969T7 300 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 SH3KBP1Q96B97 665 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 TEX37Q96LM6 180 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 MAGEB10Q96LZ2 347 aaPredicted RBP9.75□□□□□ -0.85
APTX-216ENST00000472896 ZNF599Q96NL3 588 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 COL21A1Q96P44 957 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 FYTTD1Q96QD9 318 aaKnown RBP9.75□□□□□ -0.85
APTX-216ENST00000472896 COPS4Q9BT78 406 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 B3GNT5Q9BYG0 378 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 SMG9Q9H0W8 520 aaKnown RBP9.75□□□□□ -0.85
APTX-216ENST00000472896 PIF1Q9H611 641 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 RNF121Q9H920 327 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 SMURF1Q9HCE7 757 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 AASDHPPTQ9NRN7 309 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 C14orf119Q9NWQ9 140 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 SLAMF8Q9P0V8 285 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 ATPIF1Q9UII2 106 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 PCDHB5Q9Y5E4 795 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 LAMA1P25391 3075 aa9.75□□□□□ -0.85
APTX-216ENST00000472896 LNP1A1A4G5 178 aa9.74□□□□□ -0.85
APTX-216ENST00000472896 FAM220BPB1ANY3 271 aa9.74□□□□□ -0.85
APTX-216ENST00000472896 PATE3B3GLJ2 98 aa9.74□□□□□ -0.85
APTX-216ENST00000472896 PLD2O14939 933 aa9.74□□□□□ -0.85
APTX-216ENST00000472896 PEX14O75381 377 aa9.74□□□□□ -0.85
APTX-216ENST00000472896 VPS26AO75436 327 aa9.74□□□□□ -0.85
APTX-216ENST00000472896 SERPINI2O75830 405 aa9.74□□□□□ -0.85
APTX-216ENST00000472896 PRLP01236 227 aa9.74□□□□□ -0.85
APTX-216ENST00000472896 CDK1P06493 297 aa9.74□□□□□ -0.85
APTX-216ENST00000472896 PRKACAP17612 351 aa9.74□□□□□ -0.85
APTX-216ENST00000472896 PRKACGP22612 351 aa9.74□□□□□ -0.85
APTX-216ENST00000472896 CFL1P23528 166 aaKnown RBP9.74□□□□□ -0.85
APTX-216ENST00000472896 CHMP24386 653 aa9.74□□□□□ -0.85
APTX-216ENST00000472896 RPL9P32969 192 aaKnown RBP9.74□□□□□ -0.85
APTX-216ENST00000472896 TNFSF8P32971 234 aa9.74□□□□□ -0.85
APTX-216ENST00000472896 SOX11P35716 441 aa9.74□□□□□ -0.85
APTX-216ENST00000472896 MAGEA2P43356 314 aa9.74□□□□□ -0.85
APTX-216ENST00000472896 FOXA1P55317 472 aa9.74□□□□□ -0.85
APTX-216ENST00000472896 TPI1P60174 286 aa9.74□□□□□ -0.85
APTX-216ENST00000472896 B2MP61769 119 aa9.74□□□□□ -0.85
APTX-216ENST00000472896 SCAPQ12770 1279 aa9.74□□□□□ -0.85
APTX-216ENST00000472896 EIF4HQ15056 248 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms