RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 LIME1Q9H400 295 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 RAB6BQ9NRW1 208 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 ABCF3Q9NUQ8 709 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 GNPTGQ9UJJ9 305 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 ANAPC5Q9UJX4 755 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 PLEKHA6Q9Y2H5 1048 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 CRYL1Q9Y2S2 319 aa8.75□□□□□ -1.01
VCL-204ENST00000472585 PHF3Q92576 2039 aaKnown RBP8.75□□□□□ -1.01
VCL-204ENST00000472585 HEATR5BQ9P2D3 2071 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 ATRQ13535 2644 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 KCNE1BA0A087WTH5 132 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 A0A1B0GTH9 108 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 FAM237BA0A1B0GVD1 139 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 TCRBV7S3A2A0A539 114 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 FEZF1A0PJY2 475 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 CTAGE15A4D2H0 777 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 USP27XA6NNY8 438 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 BTNL10A8MVZ5 291 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 KIAA1324LA8MWY0 1029 aaPredicted RBP8.74□□□□□ -1.01
VCL-204ENST00000472585 F8W8V4 182 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 H0YIG0 161 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 KPNA5O15131 536 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 NME2P1O60361 137 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 PHF2O75151 1096 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 VPS26AO75436 327 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 RDH16O75452 317 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 CDC123O75794 336 aaPredicted RBP8.74□□□□□ -1.01
VCL-204ENST00000472585 VAPBO95292 243 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 NSA2O95478 260 aaKnown RBP8.74□□□□□ -1.01
VCL-204ENST00000472585 FTCDO95954 541 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 IFNB1P01574 187 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 TPOP07202 933 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 TPM1P09493 284 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 NME2P22392 152 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 STIP1P31948 543 aaKnown RBP8.74□□□□□ -1.01
VCL-204ENST00000472585 RPL22P35268 128 aaKnown RBP8.74□□□□□ -1.01
VCL-204ENST00000472585 FDFT1P37268 417 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 COILP38432 576 aaPredicted RBP8.74□□□□□ -1.01
VCL-204ENST00000472585 RFC3P40938 356 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 CLCN7P51798 805 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 NAP1L1P55209 391 aaKnown RBP8.74□□□□□ -1.01
VCL-204ENST00000472585 USP10Q14694 798 aaKnown RBP8.74□□□□□ -1.01
VCL-204ENST00000472585 ARHGAP19Q14CB8 494 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 SPA17Q15506 151 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 MAPKAPK3Q16644 382 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 AARS2Q5JTZ9 985 aaKnown RBP8.74□□□□□ -1.01
VCL-204ENST00000472585 PAPD4Q6PIY7 484 aaKnown RBP8.74□□□□□ -1.01
VCL-204ENST00000472585 CENPUQ71F23 418 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 CXXC5Q7LFL8 322 aaKnown RBP8.74□□□□□ -1.01
VCL-204ENST00000472585 CAMKMTQ7Z624 323 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 PCGF5Q86SE9 256 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 CTAGE6Q86UF2 777 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 RNF214Q8ND24 703 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 MYRIPQ8NFW9 859 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 RND1Q92730 232 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 RBCK1Q9BYM8 510 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 TRIM45Q9H8W5 580 aaPredicted RBP8.74□□□□□ -1.01
VCL-204ENST00000472585 LRFN1Q9P244 771 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 RNF6Q9Y252 685 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 FN1P02751 2386 aaKnown RBP8.74□□□□□ -1.01
VCL-204ENST00000472585 DNAJC13O75165 2243 aa8.74□□□□□ -1.01
VCL-204ENST00000472585 GOLGA6L9A6NEM1 432 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 ZNF860A6NHJ4 632 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 FAM171A2A8MVW0 826 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 GFYI3L273 518 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 PROM1O43490 865 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 CTAG2O75638 210 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 SLC25A12O75746 678 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 APRTP07741 180 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 INHBBP09529 407 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 PKMP14618 531 aaKnown RBP8.73□□□□□ -1.01
VCL-204ENST00000472585 ZNF24P17028 368 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 CHRM3P20309 590 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 MGAT1P26572 445 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 TPP2P29144 1249 aaPredicted RBP8.73□□□□□ -1.01
VCL-204ENST00000472585 IMPA1P29218 277 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 ATP5DP30049 168 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 PTGS2P35354 604 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 PPARGP37231 505 aaPredicted RBP8.73□□□□□ -1.01
VCL-204ENST00000472585 AVPR1BP47901 424 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 SLC26A5P58743 744 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 OC90Q02509 493 aaPredicted RBP8.73□□□□□ -1.01
VCL-204ENST00000472585 SNX1Q13596 522 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 PTK6Q13882 451 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 SIX1Q15475 284 aaPredicted RBP8.73□□□□□ -1.01
VCL-204ENST00000472585 NSDHLQ15738 373 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 TYSND1Q2T9J0 566 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 CMPK2Q5EBM0 449 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 MFSD4BQ5TF39 518 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 ZNF549Q6P9A3 640 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 LYPD8Q6UX82 237 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 ADCK2Q7Z695 626 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 CD163Q86VB7 1156 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 SLC26A11Q86WA9 606 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 RPS19BP1Q86WX3 136 aaKnown RBP8.73□□□□□ -1.01
VCL-204ENST00000472585 LRRC6Q86X45 466 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 PRIMA1Q86XR5 153 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 CCDC71Q8IV32 467 aaPredicted RBP8.73□□□□□ -1.01
VCL-204ENST00000472585 SULF2Q8IWU5 870 aa8.73□□□□□ -1.01
VCL-204ENST00000472585 RAB42Q8N4Z0 105 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms