RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 PWP1Q13610 501 aa21.25■□□□□ 0.99
C9orf3-213ENST00000471978 CSHL1Q14406 222 aa21.25■□□□□ 0.99
C9orf3-213ENST00000471978 CATSPEREQ5SY80 951 aa21.25■□□□□ 0.99
C9orf3-213ENST00000471978 ANKMY2Q8IV38 441 aa21.25■□□□□ 0.99
C9orf3-213ENST00000471978 AFAP1L2Q8N4X5 818 aa21.25■□□□□ 0.99
C9orf3-213ENST00000471978 ZNF740Q8NDX6 193 aa21.25■□□□□ 0.99
C9orf3-213ENST00000471978 OR5T3Q8NGG3 340 aa21.25■□□□□ 0.99
C9orf3-213ENST00000471978 NR4A3Q92570 626 aa21.25■□□□□ 0.99
C9orf3-213ENST00000471978 TRIM51Q9BSJ1 452 aa21.25■□□□□ 0.99
C9orf3-213ENST00000471978 ZFATQ9P243 1243 aa21.25■□□□□ 0.99
C9orf3-213ENST00000471978 IKZF3Q9UKT9 509 aa21.25■□□□□ 0.99
C9orf3-213ENST00000471978 ZGRF1Q86YA3 2104 aa21.25■□□□□ 0.99
C9orf3-213ENST00000471978 PRAMEF2O60811 474 aa21.24■□□□□ 0.99
C9orf3-213ENST00000471978 STSP08842 583 aa21.24■□□□□ 0.99
C9orf3-213ENST00000471978 SAT1P21673 171 aa21.24■□□□□ 0.99
C9orf3-213ENST00000471978 DCTP40126 519 aa21.24■□□□□ 0.99
C9orf3-213ENST00000471978 GNG11P61952 73 aa21.24■□□□□ 0.99
C9orf3-213ENST00000471978 RHAGQ02094 409 aa21.24■□□□□ 0.99
C9orf3-213ENST00000471978 FRG1Q14331 258 aaKnown RBP21.24■□□□□ 0.99
C9orf3-213ENST00000471978 ABRAXAS2Q15018 415 aa21.24■□□□□ 0.99
C9orf3-213ENST00000471978 NSDHLQ15738 373 aa21.24■□□□□ 0.99
C9orf3-213ENST00000471978 FCRLBQ6BAA4 426 aa21.24■□□□□ 0.99
C9orf3-213ENST00000471978 SBSNQ6UWP8 590 aa21.24■□□□□ 0.99
C9orf3-213ENST00000471978 TMEM207Q6UWW9 146 aa21.24■□□□□ 0.99
C9orf3-213ENST00000471978 PLPP5Q8NEB5 264 aa21.24■□□□□ 0.99
C9orf3-213ENST00000471978 SLC5A11Q8WWX8 675 aa21.24■□□□□ 0.99
C9orf3-213ENST00000471978 NEIL2Q969S2 332 aa21.24■□□□□ 0.99
C9orf3-213ENST00000471978 ZNF354BQ96LW1 612 aa21.24■□□□□ 0.99
C9orf3-213ENST00000471978 TSNARE1Q96NA8 513 aa21.24■□□□□ 0.99
C9orf3-213ENST00000471978 OR1F2PQ96R84 312 aa21.24■□□□□ 0.99
C9orf3-213ENST00000471978 KCNK13Q9HB14 408 aa21.24■□□□□ 0.99
C9orf3-213ENST00000471978 PSAT1Q9Y617 370 aa21.24■□□□□ 0.99
C9orf3-213ENST00000471978 DIDO1Q9BTC0 2240 aaKnown RBP21.24■□□□□ 0.99
C9orf3-213ENST00000471978 A0A1B0GUH1 482 aa21.23■□□□□ 0.99
C9orf3-213ENST00000471978 TTI1O43156 1089 aa21.23■□□□□ 0.99
C9orf3-213ENST00000471978 GALR3O60755 368 aaPredicted RBP21.23■□□□□ 0.99
C9orf3-213ENST00000471978 SEC31AO94979 1220 aaKnown RBP21.23■□□□□ 0.99
C9orf3-213ENST00000471978 RASAL1O95294 804 aa21.23■□□□□ 0.99
C9orf3-213ENST00000471978 ALOX12P18054 663 aa21.23■□□□□ 0.99
C9orf3-213ENST00000471978 KCNK10P57789 538 aa21.23■□□□□ 0.99
C9orf3-213ENST00000471978 SKP1P63208 163 aa21.23■□□□□ 0.99
C9orf3-213ENST00000471978 ACTN3Q08043 901 aaPredicted RBP21.23■□□□□ 0.99
C9orf3-213ENST00000471978 RGS1Q08116 209 aa21.23■□□□□ 0.99
C9orf3-213ENST00000471978 EXT1Q16394 746 aa21.23■□□□□ 0.99
C9orf3-213ENST00000471978 DEFB134Q4QY38 66 aa21.23■□□□□ 0.99
C9orf3-213ENST00000471978 SFT2D3Q587I9 215 aa21.23■□□□□ 0.99
C9orf3-213ENST00000471978 ACER2Q5QJU3 275 aa21.23■□□□□ 0.99
C9orf3-213ENST00000471978 H3F3CQ6NXT2 135 aa21.23■□□□□ 0.99
C9orf3-213ENST00000471978 STRA8Q7Z7C7 330 aa21.23■□□□□ 0.99
C9orf3-213ENST00000471978 M1APQ8TC57 530 aa21.23■□□□□ 0.99
C9orf3-213ENST00000471978 TRIM31Q9BZY9 425 aa21.23■□□□□ 0.99
C9orf3-213ENST00000471978 SPNS1Q9H2V7 528 aa21.23■□□□□ 0.99
C9orf3-213ENST00000471978 LANCL2Q9NS86 450 aa21.23■□□□□ 0.99
C9orf3-213ENST00000471978 ZFP69BQ9UJL9 534 aa21.23■□□□□ 0.99
C9orf3-213ENST00000471978 DYRK1BQ9Y463 629 aa21.23■□□□□ 0.99
C9orf3-213ENST00000471978 SAR1BQ9Y6B6 198 aa21.23■□□□□ 0.99
C9orf3-213ENST00000471978 SCN2AQ99250 2005 aa21.22■□□□□ 0.99
C9orf3-213ENST00000471978 LRBAP50851 2863 aa21.22■□□□□ 0.99
C9orf3-213ENST00000471978 CRYABP02511 175 aaKnown RBP21.22■□□□□ 0.99
C9orf3-213ENST00000471978 FHP07954 510 aa21.22■□□□□ 0.99
C9orf3-213ENST00000471978 ZNF37AP17032 561 aaPredicted RBP21.22■□□□□ 0.99
C9orf3-213ENST00000471978 SCTRP47872 440 aa21.22■□□□□ 0.99
C9orf3-213ENST00000471978 MGAT5Q09328 741 aa21.22■□□□□ 0.99
C9orf3-213ENST00000471978 PDIA2Q13087 525 aaKnown RBP21.22■□□□□ 0.99
C9orf3-213ENST00000471978 PPP1R3AQ16821 1122 aa21.22■□□□□ 0.99
C9orf3-213ENST00000471978 PAPD4Q6PIY7 484 aaKnown RBP21.22■□□□□ 0.99
C9orf3-213ENST00000471978 GFRALQ6UXV0 394 aa21.22■□□□□ 0.99
C9orf3-213ENST00000471978 FJX1Q86VR8 437 aa21.22■□□□□ 0.99
C9orf3-213ENST00000471978 BEST3Q8N1M1 668 aa21.22■□□□□ 0.99
C9orf3-213ENST00000471978 FBXO36Q8NEA4 188 aa21.22■□□□□ 0.99
C9orf3-213ENST00000471978 DNAJB8Q8NHS0 232 aa21.22■□□□□ 0.99
C9orf3-213ENST00000471978 NT5CQ8TCD5 201 aa21.22■□□□□ 0.99
C9orf3-213ENST00000471978 TSLPQ969D9 159 aa21.22■□□□□ 0.99
C9orf3-213ENST00000471978 TBC1D20Q96BZ9 403 aa21.22■□□□□ 0.99
C9orf3-213ENST00000471978 LPAR4Q99677 370 aa21.22■□□□□ 0.99
C9orf3-213ENST00000471978 NAPGQ99747 312 aaPredicted RBP21.22■□□□□ 0.99
C9orf3-213ENST00000471978 ABI3Q9P2A4 366 aa21.22■□□□□ 0.99
C9orf3-213ENST00000471978 MAGEB17A8MXT2 336 aa21.21■□□□□ 0.99
C9orf3-213ENST00000471978 CDC7O00311 574 aa21.21■□□□□ 0.99
C9orf3-213ENST00000471978 TP73O15350 636 aa21.21■□□□□ 0.99
C9orf3-213ENST00000471978 CHST10O43529 356 aa21.21■□□□□ 0.99
C9orf3-213ENST00000471978 DNAJB6O75190 326 aa21.21■□□□□ 0.99
C9orf3-213ENST00000471978 B3GALT4O96024 378 aa21.21■□□□□ 0.99
C9orf3-213ENST00000471978 ZNF888P0CJ79 500 aaPredicted RBP21.21■□□□□ 0.99
C9orf3-213ENST00000471978 AHRP35869 848 aa21.21■□□□□ 0.99
C9orf3-213ENST00000471978 OLR1P78380 273 aa21.21■□□□□ 0.99
C9orf3-213ENST00000471978 SRSF11Q05519 484 aaKnown RBP21.21■□□□□ 0.99
C9orf3-213ENST00000471978 ZRSR2Q15696 482 aaKnown RBP21.21■□□□□ 0.99
C9orf3-213ENST00000471978 C1QL3Q5VWW1 255 aa21.21■□□□□ 0.99
C9orf3-213ENST00000471978 NIPAL1Q6NVV3 410 aa21.21■□□□□ 0.99
C9orf3-213ENST00000471978 ABHD13Q7L211 337 aa21.21■□□□□ 0.99
C9orf3-213ENST00000471978 THOC6Q86W42 341 aaKnown RBP21.21■□□□□ 0.99
C9orf3-213ENST00000471978 ZC3HC1Q86WB0 502 aaKnown RBP21.21■□□□□ 0.99
C9orf3-213ENST00000471978 NKAPQ8N5F7 415 aaKnown RBP21.21■□□□□ 0.99
C9orf3-213ENST00000471978 PELI2Q9HAT8 420 aa21.21■□□□□ 0.99
C9orf3-213ENST00000471978 MMP25Q9NPA2 562 aa21.21■□□□□ 0.99
C9orf3-213ENST00000471978 MOCS1Q9NZB8 636 aa21.21■□□□□ 0.99
C9orf3-213ENST00000471978 CROCCQ5TZA2 2017 aa21.21■□□□□ 0.99
C9orf3-213ENST00000471978 MYO9AB2RTY4 2548 aa21.2■□□□□ 0.98
C9orf3-213ENST00000471978 FAM95CA0A1B0GW59 222 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms