RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 ERVMER34-1Q9H9K5 563 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 RNPEPL1Q9HAU8 725 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 IL1RL2Q9HB29 575 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 FAM120CQ9NX05 1096 aaKnown RBP8.98□□□□□ -0.97
VPS52-216ENST00000471309 ACTR10Q9NZ32 417 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 CD300AQ9UGN4 299 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 BCAP29Q9UHQ4 241 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 ADAM29Q9UKF5 820 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 MAN2B2Q9Y2E5 1009 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 NEUROG3Q9Y4Z2 214 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 PCDHGA4Q9Y5G9 962 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 PCDHA9Q9Y5H5 950 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 KLK4Q9Y5K2 254 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 AP1M2Q9Y6Q5 423 aa8.98□□□□□ -0.97
VPS52-216ENST00000471309 A0A096LPI6 279 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 TRBV5-3A0A0A0MS03 114 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 A0A1B0GTW7 788 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 GSAPA4D1B5 854 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 OR6C74A6NCV1 312 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 OR5K3A6NET4 321 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 PRORSD1PA6NEY8 169 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 LILRA5A6NI73 299 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 LMO7DNF2Z398 122 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 SAP18O00422 153 aaKnown RBP8.97□□□□□ -0.97
VPS52-216ENST00000471309 ACOT8O14734 319 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 CAPN5O15484 640 aaPredicted RBP8.97□□□□□ -0.97
VPS52-216ENST00000471309 AQP9O43315 295 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 LCMT2O60294 686 aaKnown RBP8.97□□□□□ -0.97
VPS52-216ENST00000471309 DNAJA2O60884 412 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 FKBP6O75344 327 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 SH3BGRLO75368 114 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 ERN1O75460 977 aaKnown RBP8.97□□□□□ -0.97
VPS52-216ENST00000471309 PIAS2O75928 621 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 BCAS2O75934 225 aaPredicted RBP8.97□□□□□ -0.97
VPS52-216ENST00000471309 LRATO95237 230 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 PSMG1O95456 288 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 HSD17B1P14061 328 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 COX7A2P14406 83 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 HOXB9P17482 250 aaPredicted RBP8.97□□□□□ -0.97
VPS52-216ENST00000471309 TPP2P29144 1249 aaPredicted RBP8.97□□□□□ -0.97
VPS52-216ENST00000471309 CSNK1EP49674 416 aaKnown RBP8.97□□□□□ -0.97
VPS52-216ENST00000471309 EEFSECP57772 596 aaKnown RBP8.97□□□□□ -0.97
VPS52-216ENST00000471309 RPS15AP62244 130 aaKnown RBP8.97□□□□□ -0.97
VPS52-216ENST00000471309 RELAQ04206 551 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 LRRC74AQ0VAA2 488 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 TRAP1Q12931 704 aaKnown RBP8.97□□□□□ -0.97
VPS52-216ENST00000471309 BNIP2Q12982 314 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 PDE7AQ13946 482 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 CCNIQ14094 377 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 FLOT2Q14254 428 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 TRIM25Q14258 630 aaKnown RBP8.97□□□□□ -0.97
VPS52-216ENST00000471309 HKDC1Q2TB90 917 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 C6orf10Q5SRN2 563 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 AAGABQ6PD74 315 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 OGFOD3Q6PK18 319 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 SPESP1Q6UW49 350 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 OOSP2Q86WS3 158 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 C17orf82Q86X59 251 aaPredicted RBP8.97□□□□□ -0.97
VPS52-216ENST00000471309 PLD3Q8IV08 490 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 SFTPA2Q8IWL1 248 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 FAM20CQ8IXL6 584 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 TMEM132CQ8N3T6 1108 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 CDC26Q8NHZ8 85 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 WDR48Q8TAF3 677 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 NUDT8Q8WV74 236 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 GAB3Q8WWW8 586 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 NELL1Q92832 810 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 RGMAQ96B86 450 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 ZNF764Q96H86 408 aaPredicted RBP8.97□□□□□ -0.97
VPS52-216ENST00000471309 ITCHQ96J02 903 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 NECAB3Q96P71 396 aaPredicted RBP8.97□□□□□ -0.97
VPS52-216ENST00000471309 F2RL3Q96RI0 385 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 PRPF18Q99633 342 aaKnown RBP8.97□□□□□ -0.97
VPS52-216ENST00000471309 CGREF1Q99674 301 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 REXO4Q9GZR2 422 aaKnown RBP8.97□□□□□ -0.97
VPS52-216ENST00000471309 MUC13Q9H3R2 512 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 SERHLQ9NQF3 203 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 CMTM6Q9NX76 183 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 ATP6V1HQ9UI12 483 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 PACSIN3Q9UKS6 424 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 DOLKQ9UPQ8 538 aa8.97□□□□□ -0.97
VPS52-216ENST00000471309 WBP11Q9Y2W2 641 aaKnown RBP8.97□□□□□ -0.97
VPS52-216ENST00000471309 A0A0J9YY10 115 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 ARHGAP10A1A4S6 786 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 LRIT2A6NDA9 550 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 YY2O15391 372 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 ZW10O43264 779 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 AKAP10O43572 662 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 NOBOXO60393 691 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 TBX19O60806 448 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 KRT36O76013 467 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 KLK1P06870 262 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 ANXA6P08133 673 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 HOXB3P14651 431 aaPredicted RBP8.96□□□□□ -0.98
VPS52-216ENST00000471309 POLR2CP19387 275 aaPredicted RBP8.96□□□□□ -0.98
VPS52-216ENST00000471309 MAGP20916 626 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 HNRNPH1P31943 449 aaKnown RBP8.96□□□□□ -0.98
VPS52-216ENST00000471309 BSGP35613 385 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 CTSKP43235 329 aa8.96□□□□□ -0.98
VPS52-216ENST00000471309 TSFMP43897 325 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms