RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 CARM1Q86X55 608 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 KRTAP11-1Q8IUC1 163 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 CD177Q8N6Q3 437 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 CCDC63Q8NA47 563 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 POMGNT2Q8NAT1 580 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 KLHL30-AS1Q8NEE0 82 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 OR4Q3Q8NH05 313 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 RHOXF1Q8NHV9 184 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 CASP10Q92851 521 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 C11orf52Q96A22 123 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 SPSB1Q96BD6 273 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 RBM41Q96IZ5 413 aaKnown RBP1.09□□□□□ -2.23
UBXN4-207ENST00000471246 LRRC3BQ96PB8 259 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 NDNQ99608 321 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 RIMS4Q9H426 269 aaPredicted RBP1.09□□□□□ -2.23
UBXN4-207ENST00000471246 XAB2Q9HCS7 855 aaKnown RBP1.09□□□□□ -2.23
UBXN4-207ENST00000471246 PHPT1Q9NRX4 125 aaPredicted RBP1.09□□□□□ -2.23
UBXN4-207ENST00000471246 POLKQ9UBT6 870 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 B4GALT7Q9UBV7 327 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 KLK11Q9UBX7 282 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 FBXL4Q9UKA2 621 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 CELA1Q9UNI1 258 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 PLCL2Q9UPR0 1127 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 VSIG4Q9Y279 399 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 COLEC10Q9Y6Z7 277 aa1.09□□□□□ -2.23
UBXN4-207ENST00000471246 NEDD4P46934 1319 aa1.09□□□□□ -2.24
UBXN4-207ENST00000471246 NPHP3Q7Z494 1330 aa1.09□□□□□ -2.24
UBXN4-207ENST00000471246 PASKQ96RG2 1323 aa1.09□□□□□ -2.24
UBXN4-207ENST00000471246 IGHV3-16A0A0C4DH30 117 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 A0A1B0GTH9 108 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 IQCMA0A1B0GVH7 501 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 A0A1W2PQ72 361 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 NKX6-3A6NJ46 265 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 A8MVM7 634 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 H3BMM5 538 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 K7EQG2 157 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 RNF103O00237 685 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 PDHXO00330 501 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 SIGLEC5O15389 551 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 RECQL5O94762 991 aaPredicted RBP1.08□□□□□ -2.24
UBXN4-207ENST00000471246 RENP00797 406 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 YES1P07947 543 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 EPORP19235 508 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 KLK2P20151 261 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 ACHEP22303 614 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 GIFP27352 417 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 DUTP33316 252 aaKnown RBP1.08□□□□□ -2.24
UBXN4-207ENST00000471246 HSD17B3P37058 310 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 CAPZA2P47755 286 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 GSK3BP49841 420 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 RAB28P51157 221 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 PRELPP51888 382 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 MTCP1P56278 107 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 ABCE1P61221 599 aaKnown RBP1.08□□□□□ -2.24
UBXN4-207ENST00000471246 ERVK-16P61578 105 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 IFI35P80217 286 aaPredicted RBP1.08□□□□□ -2.24
UBXN4-207ENST00000471246 ACY1Q03154 408 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 RBPJQ06330 500 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 RUNX3Q13761 415 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 GCKRQ14397 625 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 MAPRE1Q15691 268 aaKnown RBP1.08□□□□□ -2.24
UBXN4-207ENST00000471246 CRY2Q49AN0 593 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 LBHQ53QV2 105 aaPredicted RBP1.08□□□□□ -2.24
UBXN4-207ENST00000471246 C9orf66Q5T8R8 295 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 AGAP7PQ5VUJ5 663 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 LEMD1Q68G75 181 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 GPR139Q6DWJ6 353 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 ENPP7Q6UWV6 458 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 MCM10Q7L590 875 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 ANKRD33Q7Z3H0 272 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 PRPF39Q86UA1 669 aaKnown RBP1.08□□□□□ -2.24
UBXN4-207ENST00000471246 MFN1Q8IWA4 741 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 DND1Q8IYX4 353 aaKnown RBP1.08□□□□□ -2.24
UBXN4-207ENST00000471246 ZBED8Q8IZ13 594 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 Q8N7P7 452 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 PI4KAP1Q8N8J0 262 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 C4orf32Q8N8J7 132 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 CSNK1G2-AS1Q8NCQ2 148 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 OR5M9Q8NGP3 310 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 RFT1Q96AA3 541 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 HDAC11Q96DB2 347 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 PGM2Q96G03 612 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 CYYR1Q96J86 154 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 CNOT6LQ96LI5 555 aaKnown RBP1.08□□□□□ -2.24
UBXN4-207ENST00000471246 LURAP1Q96LR2 239 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 ZNF558Q96NG5 402 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 TAAR6Q96RI8 345 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 HNRNPABQ99729 332 aaKnown RBP1.08□□□□□ -2.24
UBXN4-207ENST00000471246 NUDT16L1Q9BRJ7 211 aaKnown RBP1.08□□□□□ -2.24
UBXN4-207ENST00000471246 RBM24Q9BX46 236 aaKnown RBP1.08□□□□□ -2.24
UBXN4-207ENST00000471246 SLITRK2Q9H156 845 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 FZD8Q9H461 694 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 FN3KQ9H479 309 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 MOB1AQ9H8S9 216 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 IL1RAPQ9NPH3 570 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 EXOC1Q9NV70 894 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 PKD2L2Q9NZM6 624 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 ZNF581Q9P0T4 197 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 ABCD2Q9UBJ2 740 aa1.08□□□□□ -2.24
UBXN4-207ENST00000471246 POLLQ9UGP5 575 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms