RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 ABRAXAS2Q15018 415 aa16.47■□□□□ 0.23
COL7A1-208ENST00000470076 MEP1AQ16819 746 aa16.47■□□□□ 0.23
COL7A1-208ENST00000470076 ZXDCQ2QGD7 858 aaPredicted RBP16.47■□□□□ 0.23
COL7A1-208ENST00000470076 MSS51Q4VC12 460 aa16.47■□□□□ 0.23
COL7A1-208ENST00000470076 SFT2D3Q587I9 215 aa16.47■□□□□ 0.23
COL7A1-208ENST00000470076 MTFR2Q6P444 385 aa16.47■□□□□ 0.23
COL7A1-208ENST00000470076 PAPD4Q6PIY7 484 aaKnown RBP16.47■□□□□ 0.23
COL7A1-208ENST00000470076 STRA8Q7Z7C7 330 aa16.47■□□□□ 0.23
COL7A1-208ENST00000470076 BEST3Q8N1M1 668 aa16.47■□□□□ 0.23
COL7A1-208ENST00000470076 AFAP1L2Q8N4X5 818 aa16.47■□□□□ 0.23
COL7A1-208ENST00000470076 PYCR2Q96C36 320 aa16.47■□□□□ 0.23
COL7A1-208ENST00000470076 PEX11GQ96HA9 241 aa16.47■□□□□ 0.23
COL7A1-208ENST00000470076 LPAR4Q99677 370 aa16.47■□□□□ 0.23
COL7A1-208ENST00000470076 LANCL2Q9NS86 450 aa16.47■□□□□ 0.23
COL7A1-208ENST00000470076 SNX12Q9UMY4 172 aa16.47■□□□□ 0.23
COL7A1-208ENST00000470076 PCNX1Q96RV3 2341 aa16.46■□□□□ 0.23
COL7A1-208ENST00000470076 TRGV8A0A0C4DH27 118 aa16.46■□□□□ 0.23
COL7A1-208ENST00000470076 ZNF860A6NHJ4 632 aa16.46■□□□□ 0.23
COL7A1-208ENST00000470076 PRSS44E7EML9 344 aa16.46■□□□□ 0.23
COL7A1-208ENST00000470076 OR1F1O43749 312 aa16.46■□□□□ 0.23
COL7A1-208ENST00000470076 GALR3O60755 368 aaPredicted RBP16.46■□□□□ 0.23
COL7A1-208ENST00000470076 ENO2P09104 434 aaPredicted RBP16.46■□□□□ 0.23
COL7A1-208ENST00000470076 ALOX12P18054 663 aa16.46■□□□□ 0.23
COL7A1-208ENST00000470076 ACTN3Q08043 901 aaPredicted RBP16.46■□□□□ 0.23
COL7A1-208ENST00000470076 ART3Q13508 389 aa16.46■□□□□ 0.23
COL7A1-208ENST00000470076 TUBA3CQ13748 450 aa16.46■□□□□ 0.23
COL7A1-208ENST00000470076 BBS9Q3SYG4 887 aa16.46■□□□□ 0.23
COL7A1-208ENST00000470076 TEDDM1Q5T9Z0 273 aa16.46■□□□□ 0.23
COL7A1-208ENST00000470076 HECTD2Q5U5R9 776 aa16.46■□□□□ 0.23
COL7A1-208ENST00000470076 FCRLBQ6BAA4 426 aa16.46■□□□□ 0.23
COL7A1-208ENST00000470076 SP5Q6BEB4 398 aaPredicted RBP16.46■□□□□ 0.23
COL7A1-208ENST00000470076 FAM45BPQ6NSW5 357 aa16.46■□□□□ 0.23
COL7A1-208ENST00000470076 TUBA3EQ6PEY2 450 aa16.46■□□□□ 0.23
COL7A1-208ENST00000470076 CRLF3Q8IUI8 442 aa16.46■□□□□ 0.23
COL7A1-208ENST00000470076 IGDCC3Q8IVU1 814 aa16.46■□□□□ 0.23
COL7A1-208ENST00000470076 PDIK1LQ8N165 341 aa16.46■□□□□ 0.23
COL7A1-208ENST00000470076 SLC5A8Q8N695 610 aa16.46■□□□□ 0.23
COL7A1-208ENST00000470076 ZNF740Q8NDX6 193 aa16.46■□□□□ 0.23
COL7A1-208ENST00000470076 FAM45AQ8TCE6 357 aa16.46■□□□□ 0.23
COL7A1-208ENST00000470076 MARVELD3Q96A59 401 aa16.46■□□□□ 0.23
COL7A1-208ENST00000470076 TBC1D20Q96BZ9 403 aa16.46■□□□□ 0.23
COL7A1-208ENST00000470076 FBXL8Q96CD0 374 aa16.46■□□□□ 0.23
COL7A1-208ENST00000470076 UTP23Q9BRU9 249 aaKnown RBP16.46■□□□□ 0.23
COL7A1-208ENST00000470076 DDX47Q9H0S4 455 aaKnown RBP16.46■□□□□ 0.23
COL7A1-208ENST00000470076 PPANQ9NQ55 473 aaKnown RBP16.46■□□□□ 0.23
COL7A1-208ENST00000470076 VWA7Q9Y334 891 aa16.46■□□□□ 0.23
COL7A1-208ENST00000470076 TTI1O43156 1089 aa16.45■□□□□ 0.22
COL7A1-208ENST00000470076 CDC123O75794 336 aaPredicted RBP16.45■□□□□ 0.22
COL7A1-208ENST00000470076 MLYCDO95822 493 aa16.45■□□□□ 0.22
COL7A1-208ENST00000470076 FHP07954 510 aa16.45■□□□□ 0.22
COL7A1-208ENST00000470076 JAK1P23458 1154 aa16.45■□□□□ 0.22
COL7A1-208ENST00000470076 CA7P43166 264 aa16.45■□□□□ 0.22
COL7A1-208ENST00000470076 TAS2R50P59544 299 aa16.45■□□□□ 0.22
COL7A1-208ENST00000470076 PMP22Q01453 160 aa16.45■□□□□ 0.22
COL7A1-208ENST00000470076 MEF2AQ02078 507 aaPredicted RBP16.45■□□□□ 0.22
COL7A1-208ENST00000470076 RGS1Q08116 209 aa16.45■□□□□ 0.22
COL7A1-208ENST00000470076 CSHL1Q14406 222 aa16.45■□□□□ 0.22
COL7A1-208ENST00000470076 USP10Q14694 798 aaKnown RBP16.45■□□□□ 0.22
COL7A1-208ENST00000470076 DEFB134Q4QY38 66 aa16.45■□□□□ 0.22
COL7A1-208ENST00000470076 LGI4Q8N135 537 aa16.45■□□□□ 0.22
COL7A1-208ENST00000470076 GPATCH11Q8N954 259 aa16.45■□□□□ 0.22
COL7A1-208ENST00000470076 MDS2Q8NDY4 140 aa16.45■□□□□ 0.22
COL7A1-208ENST00000470076 OR5T3Q8NGG3 340 aa16.45■□□□□ 0.22
COL7A1-208ENST00000470076 MOCOSQ96EN8 888 aa16.45■□□□□ 0.22
COL7A1-208ENST00000470076 PDLIM5Q96HC4 596 aaKnown RBP16.45■□□□□ 0.22
COL7A1-208ENST00000470076 OR4K3Q96R72 315 aa16.45■□□□□ 0.22
COL7A1-208ENST00000470076 RBCK1Q9BYM8 510 aa16.45■□□□□ 0.22
COL7A1-208ENST00000470076 RUBCNLQ9H714 662 aa16.45■□□□□ 0.22
COL7A1-208ENST00000470076 SLC17A6Q9P2U8 582 aa16.45■□□□□ 0.22
COL7A1-208ENST00000470076 ZFP69BQ9UJL9 534 aa16.45■□□□□ 0.22
COL7A1-208ENST00000470076 KLF2Q9Y5W3 355 aaPredicted RBP16.45■□□□□ 0.22
COL7A1-208ENST00000470076 ARHGAP10A1A4S6 786 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 CCL21O00585 134 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 CDK2AP1O14519 115 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 ZSCAN12O43309 604 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 SERPIND1P05546 499 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 CD46P15529 392 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 IVDP26440 423 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 AHRP35869 848 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 CD96P40200 585 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 CASP6P55212 293 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 OR4D2P58180 307 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 MORF4L2Q15014 288 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 OR1C1Q15619 314 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 CATSPEREQ5SY80 951 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 ABHD13Q7L211 337 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 HORMAD2Q8N7B1 307 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 TMEM178AQ8NBL3 297 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 NT5CQ8TCD5 201 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 ITLN2Q8WWU7 325 aaPredicted RBP16.44■□□□□ 0.22
COL7A1-208ENST00000470076 SLC5A11Q8WWX8 675 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 TSLPQ969D9 159 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 NEIL2Q969S2 332 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 LRRC39Q96DD0 335 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 CCDC120Q96HB5 630 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 SIGLEC12Q96PQ1 595 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 NPAS2Q99743 824 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 CLK4Q9HAZ1 481 aaKnown RBP16.44■□□□□ 0.22
COL7A1-208ENST00000470076 PLAC1Q9HBJ0 212 aa16.44■□□□□ 0.22
COL7A1-208ENST00000470076 CHST10O43529 356 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms