RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 SPTBN5Q9NRC6 3674 aaKnown RBP9.62□□□□□ -0.87
NUP50-214ENST00000469163 TRAV19A0A0A6YYK7 116 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 RB1P06400 928 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 ALPIP09923 528 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 TEX44Q53QW1 395 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 ARHGAP15Q53QZ3 475 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 FAM76BQ5HYJ3 339 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 GAREM2Q75VX8 874 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 ADGRG3Q86Y34 549 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 PGAM4Q8N0Y7 254 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 DCAKDQ8WVC6 231 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 ART5Q96L15 291 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 TRNT1Q96Q11 434 aaKnown RBP9.62□□□□□ -0.87
NUP50-214ENST00000469163 ZNF670Q9BS34 389 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 MND1Q9BWT6 205 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 BIN3Q9NQY0 253 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 EXD2Q9NVH0 621 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 SMPD3Q9NY59 655 aaPredicted RBP9.62□□□□□ -0.87
NUP50-214ENST00000469163 SLC2A6Q9UGQ3 507 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 CLEC4EQ9ULY5 219 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 LIPT1Q9Y234 373 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 FARP1Q9Y4F1 1045 aaPredicted RBP9.62□□□□□ -0.87
NUP50-214ENST00000469163 TNPO3Q9Y5L0 923 aaKnown RBP9.62□□□□□ -0.87
NUP50-214ENST00000469163 MYOFQ9NZM1 2061 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 SCN10AQ9Y5Y9 1956 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 METTL21EPA6NDL7 271 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 CSF2P04141 144 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 PRSS56P0CW18 603 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 SLC7A1P30825 629 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 SLC6A4P31645 630 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 GGT5P36269 586 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 HNF4AP41235 474 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 FAM189BP81408 668 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 PPM1JQ5JR12 505 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 TOR1AIP1Q5JTV8 583 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 TMEM31Q5JXX7 168 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 LY6G5CQ5SRR4 150 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 PNCKQ6P2M8 343 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 GPRIN3Q6ZVF9 776 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 ZDHHC13Q8IUH4 622 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 AKR7LQ8NHP1 331 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 DYNC2LI1Q8TCX1 351 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 TMCO6Q96DC7 493 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 BTN2A3PQ96KV6 586 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 SPACA7Q96KW9 195 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 ZSWIM3Q96MP5 696 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 FAM83DQ9H4H8 585 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 RC3H2Q9HBD1 1191 aaKnown RBP9.62□□□□□ -0.87
NUP50-214ENST00000469163 MUC3AQ02505 3323 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 KNTC1P50748 2209 aa9.62□□□□□ -0.87
NUP50-214ENST00000469163 ASCC3Q8N3C0 2202 aaKnown RBP9.62□□□□□ -0.87
NUP50-214ENST00000469163 ACOT8O14734 319 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 LINC01565O15544 149 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 SH3BGRLO75368 114 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 ULK1O75385 1050 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 MTX2O75431 263 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 CBX7O95931 251 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 APOC3P02656 99 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 ACADMP11310 421 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 CD36P16671 472 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 AZGP1P25311 298 aaKnown RBP9.61□□□□□ -0.87
NUP50-214ENST00000469163 PTPN3P26045 913 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 DPP6P42658 865 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 GABRB2P47870 512 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 FOXK2Q01167 660 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 TEAD4Q15561 434 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 FASTKD1Q53R41 847 aaKnown RBP9.61□□□□□ -0.87
NUP50-214ENST00000469163 NKAIN4Q8IVV8 208 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 MFSD2AQ8NA29 543 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 FAM110BQ8TC76 370 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 RPL3LQ92901 407 aaKnown RBP9.61□□□□□ -0.87
NUP50-214ENST00000469163 RNF31Q96EP0 1072 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 PELOQ9BRX2 385 aaKnown RBP9.61□□□□□ -0.87
NUP50-214ENST00000469163 DPCDQ9BVM2 203 aaPredicted RBP9.61□□□□□ -0.87
NUP50-214ENST00000469163 ZCCHC4Q9H5U6 513 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 ACSS3Q9H6R3 686 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 LDAHQ9H6V9 325 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 TM9SF3Q9HD45 589 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 A0A0G2JMZ2 1700 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 A0A0A0MRY4 1105 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 HHLA1C9JL84 531 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 SLC22A2O15244 555 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 CCNB2O95067 398 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 HLA-DQB2P05538 268 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 CHMP24386 653 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 S100PP25815 95 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 CCR2P41597 374 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 SERPINB9P50453 376 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 KLF1Q13351 362 aaPredicted RBP9.61□□□□□ -0.87
NUP50-214ENST00000469163 CAPRIN1Q14444 709 aaKnown RBP9.61□□□□□ -0.87
NUP50-214ENST00000469163 DPYSL2Q16555 572 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 ZNF470Q6ECI4 717 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 TIGD7Q6NT04 549 aaPredicted RBP9.61□□□□□ -0.87
NUP50-214ENST00000469163 TEX261Q6UWH6 196 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 CCDC149Q6ZUS6 474 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 IFNEQ86WN2 208 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 DENND6AQ8IWF6 608 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 ADGRG2Q8IZP9 1017 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 DCBLD1Q8N8Z6 715 aa9.61□□□□□ -0.87
NUP50-214ENST00000469163 C2CD4CQ8TF44 421 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms