RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 OR52N2Q8NGI0 321 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 OR2L2Q8NH16 312 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 CCL4L1Q8NHW4 92 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 STAG3L4Q8TBR4 150 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 IFI44Q8TCB0 444 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 CD200R1Q8TD46 325 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 LMX1AQ8TE12 382 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 ASZ1Q8WWH4 475 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 STON2Q8WXE9 905 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 KCNJ9Q92806 393 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 DVL3Q92997 716 aaPredicted RBP3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 RAB24Q969Q5 203 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 RGMAQ96B86 450 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 SKA1Q96BD8 255 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 PHF21BQ96EK2 531 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 MOCOSQ96EN8 888 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 PDXPQ96GD0 296 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 ZNF514Q96K75 400 aaPredicted RBP3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 CLPTM1LQ96KA5 538 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 MRGPRX4Q96LA9 322 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 FOPNLQ96NB1 174 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 C8orf49Q96NF6 230 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 OR2M4Q96R27 311 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 ADOQ96SZ5 270 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 EGFL8Q99944 293 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 H2AFJQ9BTM1 129 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 MRI1Q9BV20 369 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 MECRQ9BV79 373 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 C1QTNF1Q9BXJ1 281 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 WWP1Q9H0M0 922 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 TCEAL2Q9H3H9 227 aaPredicted RBP3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 RABEP2Q9H5N1 569 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 CNOT10Q9H9A5 744 aaKnown RBP3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 POPDC3Q9HBV1 291 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 FGF22Q9HCT0 170 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 FSCN3Q9NQT6 498 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 PRDM8Q9NQV8 689 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 PRMT8Q9NR22 394 aaPredicted RBP3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 TMEM74BQ9NUR3 256 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 ZSCAN32Q9NX65 697 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 CD274Q9NZQ7 290 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 XPR1Q9UBH6 696 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 FBXO4Q9UKT5 387 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 EMCNQ9ULC0 261 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 GPR34Q9UPC5 381 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 POLHQ9Y253 713 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 SLC17A4Q9Y2C5 497 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 TDRKHQ9Y2W6 561 aaKnown RBP3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 PLLPQ9Y342 182 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 R4GN57 208 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 DOCK9Q9BZ29 2069 aa3.96□□□□□ -1.78
TMEM39A-204ENST00000468545 PRAMEF33A0A0G2JMD5 474 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 SPTY2D1-AS1A0A0U1RR47 76 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 A0A1B0GTW7 788 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 A0A1W2PR77 199 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 SLC5A10A0PJK1 596 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 KRT87PA6NCN2 255 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 NEMP2A6NFY4 417 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 LRRC14BA6NHZ5 514 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 IFRD1O00458 451 aaPredicted RBP3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 LIN7AO14910 233 aaPredicted RBP3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 CHUKO15111 745 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 TM9SF1O15321 606 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 PRPF4O43172 522 aaKnown RBP eCLIP3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 SDC3O75056 442 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 GPC4O75487 556 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 ZWINTO95229 277 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 CFIP05156 583 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 BPGMP07738 259 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 VIMP08670 466 aaKnown RBP3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 TPBGLP0DKB5 382 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 MPC1LP0DKB6 136 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 CBSLP0DN79 551 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 GNSP15586 552 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 ZNF37AP17032 561 aaPredicted RBP3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 TSPAN8P19075 237 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 CYP2A7P20853 494 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 BGNP21810 368 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 ALDH3A1P30838 453 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 HOXA6P31267 233 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 CBSP35520 551 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 MDH1P40925 334 aaKnown RBP3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 ACTR1BP42025 376 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 MAN2A2P49641 1150 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 HK3P52790 923 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 CLRN1P58418 232 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 ACTR1AP61163 376 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 GNGT1P63211 74 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 TLE1Q04724 770 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 ILF3Q12906 894 aaKnown RBP eCLIP3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 BIRC2Q13490 618 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 FZD2Q14332 565 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 ZNF267Q14586 743 aaPredicted RBP3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 MLC1Q15049 377 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 CHI3L2Q15782 390 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 PFKFB4Q16877 469 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 KIF19Q2TAC6 998 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 CCSMST1Q4G0I0 132 aa3.95□□□□□ -1.78
TMEM39A-204ENST00000468545 CFAP157Q5JU67 520 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms