RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 ARL15Q9NXU5 204 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 ASIC3Q9UHC3 531 aa19.84■□□□□ 0.77
COL9A3-207ENST00000467819 GOLGA6L10A0A0M3HER8 536 aa19.83■□□□□ 0.77
COL9A3-207ENST00000467819 FAM227AF5H4B4 570 aa19.83■□□□□ 0.77
COL9A3-207ENST00000467819 NDUFS4O43181 175 aa19.83■□□□□ 0.77
COL9A3-207ENST00000467819 OR1F1O43749 312 aa19.83■□□□□ 0.77
COL9A3-207ENST00000467819 MAN1A2O60476 641 aa19.83■□□□□ 0.77
COL9A3-207ENST00000467819 AHSGP02765 367 aa19.83■□□□□ 0.77
COL9A3-207ENST00000467819 SERPIND1P05546 499 aa19.83■□□□□ 0.77
COL9A3-207ENST00000467819 CCR8P51685 355 aa19.83■□□□□ 0.77
COL9A3-207ENST00000467819 PGGT1BP53609 377 aa19.83■□□□□ 0.77
COL9A3-207ENST00000467819 MEP1AQ16819 746 aa19.83■□□□□ 0.77
COL9A3-207ENST00000467819 ZXDCQ2QGD7 858 aaPredicted RBP19.83■□□□□ 0.77
COL9A3-207ENST00000467819 SPANXN3Q5MJ09 141 aa19.83■□□□□ 0.77
COL9A3-207ENST00000467819 PCGF5Q86SE9 256 aa19.83■□□□□ 0.77
COL9A3-207ENST00000467819 MRGPRGQ86SM5 289 aa19.83■□□□□ 0.77
COL9A3-207ENST00000467819 MOCOSQ96EN8 888 aa19.83■□□□□ 0.77
COL9A3-207ENST00000467819 LPAR4Q99677 370 aa19.83■□□□□ 0.77
COL9A3-207ENST00000467819 UTP23Q9BRU9 249 aaKnown RBP19.83■□□□□ 0.77
COL9A3-207ENST00000467819 LANCL2Q9NS86 450 aa19.83■□□□□ 0.77
COL9A3-207ENST00000467819 SLC22A7Q9Y694 548 aa19.83■□□□□ 0.77
COL9A3-207ENST00000467819 NCOA6Q14686 2063 aaPredicted RBP19.83■□□□□ 0.76
COL9A3-207ENST00000467819 CACNA1CQ13936 2221 aa19.83■□□□□ 0.76
COL9A3-207ENST00000467819 TTI1O43156 1089 aa19.82■□□□□ 0.76
COL9A3-207ENST00000467819 TTC4O95801 387 aa19.82■□□□□ 0.76
COL9A3-207ENST00000467819 B3GALT4O96024 378 aa19.82■□□□□ 0.76
COL9A3-207ENST00000467819 OLR1P78380 273 aa19.82■□□□□ 0.76
COL9A3-207ENST00000467819 PDAP1Q13442 181 aaKnown RBP19.82■□□□□ 0.76
COL9A3-207ENST00000467819 ART3Q13508 389 aa19.82■□□□□ 0.76
COL9A3-207ENST00000467819 HERC3Q15034 1050 aa19.82■□□□□ 0.76
COL9A3-207ENST00000467819 OR1C1Q15619 314 aa19.82■□□□□ 0.76
COL9A3-207ENST00000467819 MSS51Q4VC12 460 aa19.82■□□□□ 0.76
COL9A3-207ENST00000467819 MCEMP1Q8IX19 187 aa19.82■□□□□ 0.76
COL9A3-207ENST00000467819 ZNF740Q8NDX6 193 aa19.82■□□□□ 0.76
COL9A3-207ENST00000467819 MDS2Q8NDY4 140 aa19.82■□□□□ 0.76
COL9A3-207ENST00000467819 PLPP5Q8NEB5 264 aa19.82■□□□□ 0.76
COL9A3-207ENST00000467819 SNF8Q96H20 258 aa19.82■□□□□ 0.76
COL9A3-207ENST00000467819 OR1F2PQ96R84 312 aa19.82■□□□□ 0.76
COL9A3-207ENST00000467819 OSBPL9Q96SU4 736 aa19.82■□□□□ 0.76
COL9A3-207ENST00000467819 TSPAN10Q9H1Z9 355 aaPredicted RBP19.82■□□□□ 0.76
COL9A3-207ENST00000467819 MMP25Q9NPA2 562 aa19.82■□□□□ 0.76
COL9A3-207ENST00000467819 PPANQ9NQ55 473 aaKnown RBP19.82■□□□□ 0.76
COL9A3-207ENST00000467819 MAGEB17A8MXT2 336 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 DNALI1O14645 258 aaPredicted RBP19.81■□□□□ 0.76
COL9A3-207ENST00000467819 SLC19A2O60779 497 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 GUCA1CO95843 209 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 TSPAN12O95859 305 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 IL10P22301 178 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 CD96P40200 585 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 OR4D2P58180 307 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 IL2P60568 153 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 OC90Q02509 493 aaPredicted RBP19.81■□□□□ 0.76
COL9A3-207ENST00000467819 USP10Q14694 798 aaKnown RBP19.81■□□□□ 0.76
COL9A3-207ENST00000467819 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.81■□□□□ 0.763e-8■■■□□ 16
COL9A3-207ENST00000467819 BBS9Q3SYG4 887 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 DEFB134Q4QY38 66 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 CATSPEREQ5SY80 951 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 DUPD1Q68J44 220 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 SPINK14Q6IE38 97 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 MTFR2Q6P444 385 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 KIAA0408Q6ZU52 694 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 IGDCC3Q8IVU1 814 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 CNTN4Q8IWV2 1026 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 SLC35F6Q8N357 371 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 ZNF808Q8N4W9 903 aaPredicted RBP19.81■□□□□ 0.76
COL9A3-207ENST00000467819 SLC5A8Q8N695 610 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 GPATCH11Q8N954 259 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 ABHD11Q8NFV4 315 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 OR56A3Q8NH54 315 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 ACTRT1Q8TDG2 376 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 CERS2Q96G23 380 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 OR4K3Q96R72 315 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 TRIM54Q9BYV2 358 aa19.81■□□□□ 0.76
COL9A3-207ENST00000467819 KLF2Q9Y5W3 355 aaPredicted RBP19.81■□□□□ 0.76
COL9A3-207ENST00000467819 TRBC2A0A5B9 178 aa19.8■□□□□ 0.76
COL9A3-207ENST00000467819 GABRR3A8MPY1 467 aa19.8■□□□□ 0.76
COL9A3-207ENST00000467819 GALR3O60755 368 aaPredicted RBP19.8■□□□□ 0.76
COL9A3-207ENST00000467819 DNAJB6O75190 326 aa19.8■□□□□ 0.76
COL9A3-207ENST00000467819 FHP07954 510 aa19.8■□□□□ 0.76
COL9A3-207ENST00000467819 ALOX12P18054 663 aa19.8■□□□□ 0.76
COL9A3-207ENST00000467819 EEF1DP29692 281 aaKnown RBP19.8■□□□□ 0.76
COL9A3-207ENST00000467819 CASP6P55212 293 aa19.8■□□□□ 0.76
COL9A3-207ENST00000467819 SLC26A5P58743 744 aa19.8■□□□□ 0.76
COL9A3-207ENST00000467819 TAS2R50P59544 299 aa19.8■□□□□ 0.76
COL9A3-207ENST00000467819 AFAP1L2Q8N4X5 818 aa19.8■□□□□ 0.76
COL9A3-207ENST00000467819 OR4K1Q8NGD4 311 aa19.8■□□□□ 0.76
COL9A3-207ENST00000467819 TBC1D20Q96BZ9 403 aa19.8■□□□□ 0.76
COL9A3-207ENST00000467819 TSNARE1Q96NA8 513 aa19.8■□□□□ 0.76
COL9A3-207ENST00000467819 SPNS1Q9H2V7 528 aa19.8■□□□□ 0.76
COL9A3-207ENST00000467819 TINAGQ9UJW2 476 aa19.8■□□□□ 0.76
COL9A3-207ENST00000467819 PCDHGB6Q9Y5F9 930 aa19.8■□□□□ 0.76
COL9A3-207ENST00000467819 TEP1Q99973 2627 aaKnown RBP19.8■□□□□ 0.76
COL9A3-207ENST00000467819 CHST10O43529 356 aa19.79■□□□□ 0.76
COL9A3-207ENST00000467819 B4GALT2O60909 372 aa19.79■□□□□ 0.76
COL9A3-207ENST00000467819 ZNF888P0CJ79 500 aaPredicted RBP19.79■□□□□ 0.76
COL9A3-207ENST00000467819 CD46P15529 392 aa19.79■□□□□ 0.76
COL9A3-207ENST00000467819 AP1S2P56377 157 aa19.79■□□□□ 0.76
COL9A3-207ENST00000467819 ALDH6A1Q02252 535 aaKnown RBP19.79■□□□□ 0.76
COL9A3-207ENST00000467819 RGS1Q08116 209 aa19.79■□□□□ 0.76
COL9A3-207ENST00000467819 PWP1Q13610 501 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms