RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 PITHD1Q9GZP4 211 aaPredicted RBP24.66■■□□□ 1.54
PDCD4-205ENST00000467574 NT5DC2Q9H857 520 aa24.66■■□□□ 1.54
PDCD4-205ENST00000467574 TMEM216Q9P0N5 145 aa24.66■■□□□ 1.54
PDCD4-205ENST00000467574 SLC22A7Q9Y694 548 aa24.66■■□□□ 1.54
PDCD4-205ENST00000467574 SMIM23A6NLE4 172 aa24.65■■□□□ 1.54
PDCD4-205ENST00000467574 WFS1O76024 890 aa24.65■■□□□ 1.54
PDCD4-205ENST00000467574 NSA2O95478 260 aaKnown RBP24.65■■□□□ 1.54
PDCD4-205ENST00000467574 IL1RNP18510 177 aa24.65■■□□□ 1.54
PDCD4-205ENST00000467574 CXCR2P25025 360 aa24.65■■□□□ 1.54
PDCD4-205ENST00000467574 FOLR3P41439 243 aa24.65■■□□□ 1.54
PDCD4-205ENST00000467574 CHIT1Q13231 466 aa24.65■■□□□ 1.54
PDCD4-205ENST00000467574 RBBP5Q15291 538 aaKnown RBP24.65■■□□□ 1.54
PDCD4-205ENST00000467574 ADNP2Q6IQ32 1131 aa24.65■■□□□ 1.54
PDCD4-205ENST00000467574 VN1R5Q7Z5H4 357 aa24.65■■□□□ 1.54
PDCD4-205ENST00000467574 SHISA5Q8N114 240 aa24.65■■□□□ 1.54
PDCD4-205ENST00000467574 TEX9Q8N6V9 391 aa24.65■■□□□ 1.54
PDCD4-205ENST00000467574 WBP1Q96G27 269 aa24.65■■□□□ 1.54
PDCD4-205ENST00000467574 EFCAB11Q9BUY7 163 aa24.65■■□□□ 1.54
PDCD4-205ENST00000467574 TMCO1Q9UM00 188 aa24.65■■□□□ 1.54
PDCD4-205ENST00000467574 KCNMB2Q9Y691 235 aa24.65■■□□□ 1.54
PDCD4-205ENST00000467574 COL6A6A6NMZ7 2263 aa24.64■■□□□ 1.54
PDCD4-205ENST00000467574 C4orf51C9J302 202 aa24.64■■□□□ 1.54
PDCD4-205ENST00000467574 STX16-NPEPL1H3BU86 382 aa24.64■■□□□ 1.54
PDCD4-205ENST00000467574 E2F3O00716 465 aa24.64■■□□□ 1.54
PDCD4-205ENST00000467574 STX16O14662 325 aa24.64■■□□□ 1.54
PDCD4-205ENST00000467574 FFAR3O14843 346 aa24.64■■□□□ 1.54
PDCD4-205ENST00000467574 GPR42O15529 346 aa24.64■■□□□ 1.54
PDCD4-205ENST00000467574 CDH16O75309 829 aa24.64■■□□□ 1.54
PDCD4-205ENST00000467574 H2AFYO75367 372 aaKnown RBP24.64■■□□□ 1.54
PDCD4-205ENST00000467574 TBX6O95947 436 aaPredicted RBP24.64■■□□□ 1.54
PDCD4-205ENST00000467574 IRF8Q02556 426 aa24.64■■□□□ 1.54
PDCD4-205ENST00000467574 SOWAHCQ53LP3 525 aaPredicted RBP24.64■■□□□ 1.54
PDCD4-205ENST00000467574 METTL2BQ6P1Q9 378 aaKnown RBP24.64■■□□□ 1.54
PDCD4-205ENST00000467574 KRT78Q8N1N4 520 aa24.64■■□□□ 1.54
PDCD4-205ENST00000467574 TRPV3Q8NET8 790 aa24.64■■□□□ 1.54
PDCD4-205ENST00000467574 STT3BQ8TCJ2 826 aa24.64■■□□□ 1.54
PDCD4-205ENST00000467574 THAP4Q8WY91 577 aa24.64■■□□□ 1.54
PDCD4-205ENST00000467574 ZNF282Q9UDV7 671 aaPredicted RBP24.64■■□□□ 1.54
PDCD4-205ENST00000467574 NXT1Q9UKK6 140 aaKnown RBP24.64■■□□□ 1.54
PDCD4-205ENST00000467574 ZNF490Q9ULM2 529 aaPredicted RBP24.64■■□□□ 1.54
PDCD4-205ENST00000467574 MAP4K5Q9Y4K4 846 aa24.64■■□□□ 1.54
PDCD4-205ENST00000467574 SPTA1P02549 2419 aa24.63■■□□□ 1.53
PDCD4-205ENST00000467574 SCN2AQ99250 2005 aa24.63■■□□□ 1.53
PDCD4-205ENST00000467574 H0YIG0 161 aa24.63■■□□□ 1.53
PDCD4-205ENST00000467574 PRPF4O43172 522 aaKnown RBP eCLIP24.63■■□□□ 1.53
PDCD4-205ENST00000467574 SERPIND1P05546 499 aa24.63■■□□□ 1.53
PDCD4-205ENST00000467574 SERPINA6P08185 405 aa24.63■■□□□ 1.53
PDCD4-205ENST00000467574 EPB42P16452 691 aa24.63■■□□□ 1.53
PDCD4-205ENST00000467574 MAT1AQ00266 395 aaKnown RBP24.63■■□□□ 1.53
PDCD4-205ENST00000467574 RGS1Q08116 209 aa24.63■■□□□ 1.53
PDCD4-205ENST00000467574 SSPNQ14714 243 aa24.63■■□□□ 1.53
PDCD4-205ENST00000467574 SYT16Q17RD7 645 aa24.63■■□□□ 1.53
PDCD4-205ENST00000467574 SHISA6Q6ZSJ9 500 aa24.63■■□□□ 1.53
PDCD4-205ENST00000467574 GOLGA7Q7Z5G4 137 aa24.63■■□□□ 1.53
PDCD4-205ENST00000467574 PPP1R32Q7Z5V6 425 aa24.63■■□□□ 1.53
PDCD4-205ENST00000467574 MRGPREQ86SM8 312 aa24.63■■□□□ 1.53
PDCD4-205ENST00000467574 EXD3Q8N9H8 876 aa24.63■■□□□ 1.53
PDCD4-205ENST00000467574 PHF21BQ96EK2 531 aa24.63■■□□□ 1.53
PDCD4-205ENST00000467574 SOX17Q9H6I2 414 aaPredicted RBP24.63■■□□□ 1.53
PDCD4-205ENST00000467574 TRPC4Q9UBN4 977 aa24.63■■□□□ 1.53
PDCD4-205ENST00000467574 MAN2B2Q9Y2E5 1009 aa24.63■■□□□ 1.53
PDCD4-205ENST00000467574 TNPO3Q9Y5L0 923 aaKnown RBP24.63■■□□□ 1.53
PDCD4-205ENST00000467574 A8MT66 165 aa24.62■■□□□ 1.53
PDCD4-205ENST00000467574 SMIM24O75264 130 aa24.62■■□□□ 1.53
PDCD4-205ENST00000467574 KLHL18O94889 574 aa24.62■■□□□ 1.53
PDCD4-205ENST00000467574 GSTA1P08263 222 aa24.62■■□□□ 1.53
PDCD4-205ENST00000467574 ZGLP1P0C6A0 271 aa24.62■■□□□ 1.53
PDCD4-205ENST00000467574 GSTM2P28161 218 aa24.62■■□□□ 1.53
PDCD4-205ENST00000467574 EEF1DP29692 281 aaKnown RBP24.62■■□□□ 1.53
PDCD4-205ENST00000467574 OTX2P32243 289 aa24.62■■□□□ 1.53
PDCD4-205ENST00000467574 AVPR1BP47901 424 aa24.62■■□□□ 1.53
PDCD4-205ENST00000467574 GTF2H2Q13888 395 aa24.62■■□□□ 1.53
PDCD4-205ENST00000467574 VWA2Q5GFL6 755 aa24.62■■□□□ 1.53
PDCD4-205ENST00000467574 GTF2H2CQ6P1K8 395 aa24.62■■□□□ 1.53
PDCD4-205ENST00000467574 ZC3H7AQ8IWR0 971 aaKnown RBP24.62■■□□□ 1.53
PDCD4-205ENST00000467574 TTLQ8NG68 377 aa24.62■■□□□ 1.53
PDCD4-205ENST00000467574 UTP15Q8TED0 518 aaKnown RBP24.62■■□□□ 1.53
PDCD4-205ENST00000467574 SEC16BQ96JE7 1060 aa24.62■■□□□ 1.53
PDCD4-205ENST00000467574 RHBGQ9H310 441 aa24.62■■□□□ 1.53
PDCD4-205ENST00000467574 KLHL31Q9H511 634 aa24.62■■□□□ 1.53
PDCD4-205ENST00000467574 ANKHQ9HCJ1 492 aa24.62■■□□□ 1.53
PDCD4-205ENST00000467574 PCTPQ9UKL6 214 aa24.62■■□□□ 1.53
PDCD4-205ENST00000467574 EMCNQ9ULC0 261 aa24.62■■□□□ 1.53
PDCD4-205ENST00000467574 SGK494L7N484 410 aa24.61■■□□□ 1.53
PDCD4-205ENST00000467574 B3GALT4O96024 378 aa24.61■■□□□ 1.53
PDCD4-205ENST00000467574 RPS17P08708 135 aaKnown RBP24.61■■□□□ 1.53
PDCD4-205ENST00000467574 FAM87AP0C7U9 286 aa24.61■■□□□ 1.53
PDCD4-205ENST00000467574 ZNF888P0CJ79 500 aaPredicted RBP24.61■■□□□ 1.53
PDCD4-205ENST00000467574 SMIM10L1P0DMW3 83 aa24.61■■□□□ 1.53
PDCD4-205ENST00000467574 ALOX12P18054 663 aa24.61■■□□□ 1.53
PDCD4-205ENST00000467574 POLE2P56282 527 aa24.61■■□□□ 1.53
PDCD4-205ENST00000467574 KLC1Q07866 573 aa24.61■■□□□ 1.53
PDCD4-205ENST00000467574 LAPTM5Q13571 262 aa24.61■■□□□ 1.53
PDCD4-205ENST00000467574 ATP1A4Q13733 1029 aa24.61■■□□□ 1.53
PDCD4-205ENST00000467574 HERC3Q15034 1050 aa24.61■■□□□ 1.53
PDCD4-205ENST00000467574 CPZQ66K79 652 aa24.61■■□□□ 1.53
PDCD4-205ENST00000467574 RAB43Q86YS6 212 aa24.61■■□□□ 1.53
PDCD4-205ENST00000467574 LSM14AQ8ND56 463 aaKnown RBP24.61■■□□□ 1.53
PDCD4-205ENST00000467574 APOBEC4Q8WW27 367 aaKnown RBP24.61■■□□□ 1.53
PDCD4-205ENST00000467574 SMIM10Q96HG1 83 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms