RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 MDC1Q14676 2089 aaKnown RBP5.22□□□□□ -1.57
PTCD3-207ENST00000467273 CACNA1CQ13936 2221 aa5.21□□□□□ -1.57
PTCD3-207ENST00000467273 MXRA5Q9NR99 2828 aa5.21□□□□□ -1.57
PTCD3-207ENST00000467273 JMJD1CQ15652 2540 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 A0A1W2PPL8 197 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 TRIM49BA6NDI0 452 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 OR5K3A6NET4 321 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 PDZK1P1A8MUH7 402 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 GOLGA8SH3BPF8 625 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 F2RL2O00254 374 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 PHGDHO43175 533 aaKnown RBP5.21□□□□□ -1.58
PTCD3-207ENST00000467273 PGLSO95336 258 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 FGFR1OPO95684 399 aaKnown RBP5.21□□□□□ -1.58
PTCD3-207ENST00000467273 ATP1A1P05023 1023 aaKnown RBP5.21□□□□□ -1.58
PTCD3-207ENST00000467273 ALOX15P16050 662 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-207ENST00000467273 ZNF7P17097 686 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-207ENST00000467273 MAKP20794 623 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 CYP2A7P20853 494 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 IDSP22304 550 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 STIP1P31948 543 aaKnown RBP5.21□□□□□ -1.58
PTCD3-207ENST00000467273 PRIM2P49643 509 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 NDUFA8P51970 172 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 CSE1LP55060 971 aaKnown RBP5.21□□□□□ -1.58
PTCD3-207ENST00000467273 GSCP56915 257 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-207ENST00000467273 KCNK10P57789 538 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 RPL26P61254 145 aaKnown RBP5.21□□□□□ -1.58
PTCD3-207ENST00000467273 CSNK1G2P78368 415 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 ADORA2A-AS1P86434 159 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 Q0VFX4 171 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 SP140Q13342 867 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 NFYCQ13952 458 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 CDO1Q16878 200 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 INSCQ1MX18 579 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 C15orf59Q2T9L4 293 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-207ENST00000467273 GAGE13Q4V321 117 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 ZNF789Q5FWF6 425 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 HENMT1Q5T8I9 393 aaKnown RBP5.21□□□□□ -1.58
PTCD3-207ENST00000467273 ARMC12Q5T9G4 340 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 FNDC7Q5VTL7 733 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 LCN10Q6JVE6 187 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 TLDC1Q6P9B6 456 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 ISLR2Q6UXK2 745 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 GBP6Q6ZN66 633 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 Q6ZSN1 163 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 ZNF572Q7Z3I7 529 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-207ENST00000467273 POLNQ7Z5Q5 900 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 TSPAN33Q86UF1 283 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 OOSP2Q86WS3 158 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 CMTM4Q8IZR5 234 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 EID3Q8N140 333 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 GSDMBQ8TAX9 411 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 PROKR1Q8TCW9 393 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 MGARPQ8TDB4 240 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 FAM172AQ8WUF8 416 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 PIH1D2Q8WWB5 315 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 RXFP2Q8WXD0 754 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 CFHR4Q92496 578 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 APIPQ96GX9 242 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 CCDC138Q96M89 665 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 LYSMD1Q96S90 227 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 MGME1Q9BQP7 344 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 RIOK2Q9BVS4 552 aaKnown RBP5.21□□□□□ -1.58
PTCD3-207ENST00000467273 C1orf43Q9BWL3 253 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 LHPPQ9H008 270 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 MRM3Q9HC36 420 aaKnown RBP5.21□□□□□ -1.58
PTCD3-207ENST00000467273 SEC14L3Q9UDX4 400 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 CD84Q9UIB8 345 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 SERTAD3Q9UJW9 196 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 RPL26L1Q9UNX3 145 aaKnown RBP5.21□□□□□ -1.58
PTCD3-207ENST00000467273 CORO2BQ9UQ03 480 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 PCYT1BQ9Y5K3 369 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-207ENST00000467273 CSAG2Q9Y5P2 127 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 AP1M2Q9Y6Q5 423 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 CSPG4Q6UVK1 2322 aa5.21□□□□□ -1.58
PTCD3-207ENST00000467273 PRRC2AP48634 2157 aaKnown RBP5.21□□□□□ -1.58
PTCD3-207ENST00000467273 FBN1P35555 2871 aaKnown RBP5.2□□□□□ -1.58
PTCD3-207ENST00000467273 ATRQ13535 2644 aa5.2□□□□□ -1.58
PTCD3-207ENST00000467273 TRAV17A0A0B4J275 112 aa5.2□□□□□ -1.58
PTCD3-207ENST00000467273 A0A0J9YYE9 177 aa5.2□□□□□ -1.58
PTCD3-207ENST00000467273 E7EQ34 232 aa5.2□□□□□ -1.58
PTCD3-207ENST00000467273 C19orf84I3L1E1 186 aa5.2□□□□□ -1.58
PTCD3-207ENST00000467273 KPNA5O15131 536 aa5.2□□□□□ -1.58
PTCD3-207ENST00000467273 FRS3O43559 492 aa5.2□□□□□ -1.58
PTCD3-207ENST00000467273 LDB2O43679 373 aa5.2□□□□□ -1.58
PTCD3-207ENST00000467273 CDC14BO60729 498 aa5.2□□□□□ -1.58
PTCD3-207ENST00000467273 SLC19A2O60779 497 aa5.2□□□□□ -1.58
PTCD3-207ENST00000467273 B3GALNT1O75752 331 aa5.2□□□□□ -1.58
PTCD3-207ENST00000467273 UNC5CO95185 931 aa5.2□□□□□ -1.58
PTCD3-207ENST00000467273 SLC25A14O95258 325 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-207ENST00000467273 SMC2O95347 1197 aa5.2□□□□□ -1.58
PTCD3-207ENST00000467273 MLYCDO95822 493 aa5.2□□□□□ -1.58
PTCD3-207ENST00000467273 TRBC1P01850 177 aa5.2□□□□□ -1.58
PTCD3-207ENST00000467273 CD1AP06126 327 aa5.2□□□□□ -1.58
PTCD3-207ENST00000467273 SBK3P0C264 359 aa5.2□□□□□ -1.58
PTCD3-207ENST00000467273 RAP2AP10114 183 aa5.2□□□□□ -1.58
PTCD3-207ENST00000467273 BRAFP15056 766 aa5.2□□□□□ -1.58
PTCD3-207ENST00000467273 ZNF8P17098 575 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-207ENST00000467273 IGFBP2P18065 325 aa5.2□□□□□ -1.58
PTCD3-207ENST00000467273 FDXRP22570 491 aa5.2□□□□□ -1.58
PTCD3-207ENST00000467273 CA4P22748 312 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms