RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 TMEM214Q6NUQ4 689 aaKnown RBP15.24■□□□□ 0.03
GPC1-207ENST00000466624 VN1R5Q7Z5H4 357 aa15.24■□□□□ 0.03
GPC1-207ENST00000466624 CUZD1Q86UP6 607 aa15.24■□□□□ 0.03
GPC1-207ENST00000466624 ARFGAP2Q8N6H7 521 aa15.24■□□□□ 0.03
GPC1-207ENST00000466624 MVB12AQ96EY5 273 aa15.24■□□□□ 0.03
GPC1-207ENST00000466624 C10orf90Q96M02 699 aa15.24■□□□□ 0.03
GPC1-207ENST00000466624 FRG2BQ96QU4 278 aa15.24■□□□□ 0.03
GPC1-207ENST00000466624 DPH2Q9BQC3 489 aaPredicted RBP15.24■□□□□ 0.03
GPC1-207ENST00000466624 TMEM121BQ9BXQ6 578 aaPredicted RBP15.24■□□□□ 0.03
GPC1-207ENST00000466624 CUTCQ9NTM9 273 aa15.24■□□□□ 0.03
GPC1-207ENST00000466624 SLC22A7Q9Y694 548 aa15.24■□□□□ 0.03
GPC1-207ENST00000466624 NCOR2Q9Y618 2525 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 A0A1B0GX78 115 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 STMND1H3BQB6 276 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 KLF11O14901 512 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 DSCR3O14972 297 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 TBX6O95947 436 aaPredicted RBP15.23■□□□□ 0.03
GPC1-207ENST00000466624 KRT6AP02538 564 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 KRT6BP04259 564 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 CAPN1P07384 714 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 FGF4P08620 206 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 PCNAP12004 261 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 NEFHP12036 1026 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 CHN1P15882 459 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 ZNF28P17035 718 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 BGNP21810 368 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 HMOX2P30519 316 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 RORAP35398 523 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 CCR10P46092 362 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 KRT6CP48668 564 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 ARFIP1P53367 373 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 STXBP1P61764 594 aaKnown RBP15.23■□□□□ 0.03
GPC1-207ENST00000466624 CYP4F2P78329 520 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 IFT88Q13099 833 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 TTC19Q6DKK2 380 aaPredicted RBP15.23■□□□□ 0.03
GPC1-207ENST00000466624 NIPAL1Q6NVV3 410 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 KIRREL3Q8IZU9 778 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 CDYL2Q8N8U2 506 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 HUS1BQ8NHY5 278 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 MDM1Q8TC05 714 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 METTL6Q8TCB7 284 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 CMTM7Q96FZ5 175 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 MS4A8Q9BY19 250 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 SLC7A5P2Q9GIP4 190 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 ELOVL6Q9H5J4 265 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 DMRT3Q9NQL9 472 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 STARD5Q9NSY2 213 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 TXLNGQ9NUQ3 528 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 WDFY3Q8IZQ1 3526 aa15.23■□□□□ 0.03
GPC1-207ENST00000466624 SERTM1A2A2V5 107 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 LRIT2A6NDA9 550 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 NTRK1P04629 796 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 SERPIND1P05546 499 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 CHRNGP07510 517 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 UROSP10746 265 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 HSD3B1P14060 373 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 HSD3B2P26439 372 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 ARRB2P32121 409 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 ABCE1P61221 599 aaKnown RBP15.22■□□□□ 0.03
GPC1-207ENST00000466624 HERC3Q15034 1050 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 TMEM35AQ53FP2 167 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 PRAMEF17Q5VTA0 474 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 CES4AQ5XG92 561 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 ZNF385CQ66K41 422 aaPredicted RBP15.22■□□□□ 0.03
GPC1-207ENST00000466624 ATG16L1Q676U5 607 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 ADNP2Q6IQ32 1131 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 PRMT9Q6P2P2 845 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 C6orf15Q6UXA7 325 aaPredicted RBP15.22■□□□□ 0.03
GPC1-207ENST00000466624 ZNF517Q6ZMY9 492 aaPredicted RBP15.22■□□□□ 0.03
GPC1-207ENST00000466624 RNF165Q6ZSG1 346 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 TTLL10Q6ZVT0 673 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 ABHD13Q7L211 337 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 DTX1Q86Y01 620 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 DSELQ8IZU8 1212 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 AFAP1L2Q8N4X5 818 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 ESX1Q8N693 406 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 SLC38A9Q8NBW4 561 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 KCT2Q8NC54 265 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 GAL3ST3Q96A11 431 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 CLIP3Q96DZ5 547 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 GBP5Q96PP8 586 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 BRF2Q9HAW0 419 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 INTS9Q9NV88 658 aaKnown RBP15.22■□□□□ 0.03
GPC1-207ENST00000466624 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.22■□□□□ 0.03
GPC1-207ENST00000466624 AKAP13Q12802 2813 aa15.22■□□□□ 0.03
GPC1-207ENST00000466624 CEP295Q9C0D2 2601 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 AHCTF1Q8WYP5 2266 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 MEN1O00255 615 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 MANBAO00462 879 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 FFAR3O14843 346 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 AZIN1O14977 448 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 GPR42O15529 346 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 ULK1O75385 1050 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 NSA2O95478 260 aaKnown RBP15.21■□□□□ 0.03
GPC1-207ENST00000466624 HSPA4LO95757 839 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 ONECUT2O95948 504 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 KLK3P07288 261 aaPredicted RBP15.21■□□□□ 0.03
GPC1-207ENST00000466624 SMIM10L1P0DMW3 83 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 LIPCP11150 499 aa15.21■□□□□ 0.03
GPC1-207ENST00000466624 PTX3P26022 381 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms