RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 NSDHLQ15738 373 aa18.04■□□□□ 0.48
COL9A3-206ENST00000466532 SFT2D3Q587I9 215 aa18.04■□□□□ 0.48
COL9A3-206ENST00000466532 HP1BP3Q5SSJ5 553 aaPredicted RBP18.04■□□□□ 0.48
COL9A3-206ENST00000466532 TEDDM1Q5T9Z0 273 aa18.04■□□□□ 0.48
COL9A3-206ENST00000466532 HECTD2Q5U5R9 776 aa18.04■□□□□ 0.48
COL9A3-206ENST00000466532 PAPD4Q6PIY7 484 aaKnown RBP18.04■□□□□ 0.48
COL9A3-206ENST00000466532 TICAM1Q8IUC6 712 aa18.04■□□□□ 0.48
COL9A3-206ENST00000466532 CRLF3Q8IUI8 442 aa18.04■□□□□ 0.48
COL9A3-206ENST00000466532 ZNF740Q8NDX6 193 aa18.04■□□□□ 0.48
COL9A3-206ENST00000466532 PLPP5Q8NEB5 264 aa18.04■□□□□ 0.48
COL9A3-206ENST00000466532 OR4K1Q8NGD4 311 aa18.04■□□□□ 0.48
COL9A3-206ENST00000466532 OR56A3Q8NH54 315 aa18.04■□□□□ 0.48
COL9A3-206ENST00000466532 MOCOSQ96EN8 888 aa18.04■□□□□ 0.48
COL9A3-206ENST00000466532 OR4K3Q96R72 315 aa18.04■□□□□ 0.48
COL9A3-206ENST00000466532 OR1F2PQ96R84 312 aa18.04■□□□□ 0.48
COL9A3-206ENST00000466532 LPAR4Q99677 370 aa18.04■□□□□ 0.48
COL9A3-206ENST00000466532 SARGQ9BW04 601 aa18.04■□□□□ 0.48
COL9A3-206ENST00000466532 LANCL2Q9NS86 450 aa18.04■□□□□ 0.48
COL9A3-206ENST00000466532 ENTPD4Q9Y227 616 aa18.04■□□□□ 0.48
COL9A3-206ENST00000466532 TRBC2A0A5B9 178 aa18.03■□□□□ 0.48
COL9A3-206ENST00000466532 ARHGAP10A1A4S6 786 aa18.03■□□□□ 0.48
COL9A3-206ENST00000466532 PRSS44E7EML9 344 aa18.03■□□□□ 0.48
COL9A3-206ENST00000466532 HNRNPRO43390 633 aaKnown RBP18.03■□□□□ 0.48
COL9A3-206ENST00000466532 GUCA1CO95843 209 aa18.03■□□□□ 0.48
COL9A3-206ENST00000466532 SERPIND1P05546 499 aa18.03■□□□□ 0.48
COL9A3-206ENST00000466532 PWP1Q13610 501 aa18.03■□□□□ 0.48
COL9A3-206ENST00000466532 TUBA3CQ13748 450 aa18.03■□□□□ 0.48
COL9A3-206ENST00000466532 MEP1AQ16819 746 aa18.03■□□□□ 0.48
COL9A3-206ENST00000466532 FAM45BPQ6NSW5 357 aa18.03■□□□□ 0.48
COL9A3-206ENST00000466532 TUBA3EQ6PEY2 450 aa18.03■□□□□ 0.48
COL9A3-206ENST00000466532 AFAP1L2Q8N4X5 818 aa18.03■□□□□ 0.48
COL9A3-206ENST00000466532 TBC1D19Q8N5T2 526 aa18.03■□□□□ 0.48
COL9A3-206ENST00000466532 FAM45AQ8TCE6 357 aa18.03■□□□□ 0.48
COL9A3-206ENST00000466532 ATL1Q8WXF7 558 aa18.03■□□□□ 0.48
COL9A3-206ENST00000466532 SLCO2A1Q92959 643 aa18.03■□□□□ 0.48
COL9A3-206ENST00000466532 TSLPQ969D9 159 aa18.03■□□□□ 0.48
COL9A3-206ENST00000466532 MARVELD3Q96A59 401 aa18.03■□□□□ 0.48
COL9A3-206ENST00000466532 FBXL8Q96CD0 374 aa18.03■□□□□ 0.48
COL9A3-206ENST00000466532 CFAP36Q96G28 342 aa18.03■□□□□ 0.48
COL9A3-206ENST00000466532 PLAC1Q9HBJ0 212 aa18.03■□□□□ 0.48
COL9A3-206ENST00000466532 MMP25Q9NPA2 562 aa18.03■□□□□ 0.48
COL9A3-206ENST00000466532 ANKRD10Q9NXR5 420 aa18.03■□□□□ 0.48
COL9A3-206ENST00000466532 SUCOQ9UBS9 1254 aaKnown RBP18.03■□□□□ 0.48
COL9A3-206ENST00000466532 CORO1CQ9ULV4 474 aaPredicted RBP18.03■□□□□ 0.48
COL9A3-206ENST00000466532 CHMP2BQ9UQN3 213 aa18.03■□□□□ 0.48
COL9A3-206ENST00000466532 VWA7Q9Y334 891 aa18.03■□□□□ 0.48
COL9A3-206ENST00000466532 NCOA6Q14686 2063 aaPredicted RBP18.02■□□□□ 0.48
COL9A3-206ENST00000466532 ENO4A6NNW6 628 aa18.02■□□□□ 0.48
COL9A3-206ENST00000466532 MAGEB17A8MXT2 336 aa18.02■□□□□ 0.48
COL9A3-206ENST00000466532 CCL21O00585 134 aa18.02■□□□□ 0.48
COL9A3-206ENST00000466532 ZSCAN12O43309 604 aa18.02■□□□□ 0.48
COL9A3-206ENST00000466532 GALR3O60755 368 aaPredicted RBP18.02■□□□□ 0.48
COL9A3-206ENST00000466532 ALOX12P18054 663 aa18.02■□□□□ 0.48
COL9A3-206ENST00000466532 ELK3P41970 407 aa18.02■□□□□ 0.48
COL9A3-206ENST00000466532 ST13P50502 369 aaKnown RBP18.02■□□□□ 0.48
COL9A3-206ENST00000466532 OR4D2P58180 307 aa18.02■□□□□ 0.48
COL9A3-206ENST00000466532 SKP1P63208 163 aa18.02■□□□□ 0.48
COL9A3-206ENST00000466532 OLR1P78380 273 aa18.02■□□□□ 0.48
COL9A3-206ENST00000466532 RBPJQ06330 500 aa18.02■□□□□ 0.48
COL9A3-206ENST00000466532 CSHL1Q14406 222 aa18.02■□□□□ 0.48
COL9A3-206ENST00000466532 USP10Q14694 798 aaKnown RBP18.02■□□□□ 0.48
COL9A3-206ENST00000466532 DEFB134Q4QY38 66 aa18.02■□□□□ 0.48
COL9A3-206ENST00000466532 CATSPEREQ5SY80 951 aa18.02■□□□□ 0.48
COL9A3-206ENST00000466532 SP5Q6BEB4 398 aaPredicted RBP18.02■□□□□ 0.48
COL9A3-206ENST00000466532 PDIK1LQ8N165 341 aa18.02■□□□□ 0.48
COL9A3-206ENST00000466532 MDS2Q8NDY4 140 aa18.02■□□□□ 0.48
COL9A3-206ENST00000466532 SLC5A11Q8WWX8 675 aa18.02■□□□□ 0.48
COL9A3-206ENST00000466532 SIGLEC12Q96PQ1 595 aa18.02■□□□□ 0.48
COL9A3-206ENST00000466532 PCNX1Q96RV3 2341 aa18.02■□□□□ 0.48
COL9A3-206ENST00000466532 NPAS2Q99743 824 aa18.02■□□□□ 0.48
COL9A3-206ENST00000466532 OLFM1Q99784 485 aa18.02■□□□□ 0.48
COL9A3-206ENST00000466532 UTP23Q9BRU9 249 aaKnown RBP18.02■□□□□ 0.48
COL9A3-206ENST00000466532 SPNS1Q9H2V7 528 aa18.02■□□□□ 0.48
COL9A3-206ENST00000466532 SH3BGRL2Q9UJC5 107 aa18.02■□□□□ 0.48
COL9A3-206ENST00000466532 PCDHGB6Q9Y5F9 930 aa18.02■□□□□ 0.48
COL9A3-206ENST00000466532 TTI1O43156 1089 aa18.01■□□□□ 0.47
COL9A3-206ENST00000466532 CHST10O43529 356 aa18.01■□□□□ 0.47
COL9A3-206ENST00000466532 B3GALT4O96024 378 aa18.01■□□□□ 0.47
COL9A3-206ENST00000466532 FHP07954 510 aa18.01■□□□□ 0.47
COL9A3-206ENST00000466532 ENO2P09104 434 aaPredicted RBP18.01■□□□□ 0.47
COL9A3-206ENST00000466532 ZNF888P0CJ79 500 aaPredicted RBP18.01■□□□□ 0.47
COL9A3-206ENST00000466532 IVDP26440 423 aa18.01■□□□□ 0.47
COL9A3-206ENST00000466532 SLC26A5P58743 744 aa18.01■□□□□ 0.47
COL9A3-206ENST00000466532 RGS1Q08116 209 aa18.01■□□□□ 0.47
COL9A3-206ENST00000466532 OR1C1Q15619 314 aa18.01■□□□□ 0.47
COL9A3-206ENST00000466532 NIPAL1Q6NVV3 410 aa18.01■□□□□ 0.47
COL9A3-206ENST00000466532 TRMT10BQ6PF06 316 aaKnown RBP18.01■□□□□ 0.47
COL9A3-206ENST00000466532 STRA8Q7Z7C7 330 aa18.01■□□□□ 0.47
COL9A3-206ENST00000466532 SLC5A8Q8N695 610 aa18.01■□□□□ 0.47
COL9A3-206ENST00000466532 NT5CQ8TCD5 201 aa18.01■□□□□ 0.47
COL9A3-206ENST00000466532 NEIL2Q969S2 332 aa18.01■□□□□ 0.47
COL9A3-206ENST00000466532 TBC1D20Q96BZ9 403 aa18.01■□□□□ 0.47
COL9A3-206ENST00000466532 CCDC120Q96HB5 630 aa18.01■□□□□ 0.47
COL9A3-206ENST00000466532 PWWP2AQ96N64 755 aa18.01■□□□□ 0.47
COL9A3-206ENST00000466532 TSNARE1Q96NA8 513 aa18.01■□□□□ 0.47
COL9A3-206ENST00000466532 HES7Q9BYE0 225 aa18.01■□□□□ 0.47
COL9A3-206ENST00000466532 KLHL1Q9NR64 748 aa18.01■□□□□ 0.47
COL9A3-206ENST00000466532 ZFP69BQ9UJL9 534 aa18.01■□□□□ 0.47
COL9A3-206ENST00000466532 IKZF3Q9UKT9 509 aa18.01■□□□□ 0.47
COL9A3-206ENST00000466532 MAN1A2O60476 641 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms