RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 CRABP2P29373 138 aa12.27□□□□□ -0.45
XRN1-203ENST00000463916 PWP1Q13610 501 aa12.27□□□□□ -0.45
XRN1-203ENST00000463916 TUBB8Q3ZCM7 444 aa12.27□□□□□ -0.45
XRN1-203ENST00000463916 PDPRQ8NCN5 879 aa12.27□□□□□ -0.45
XRN1-203ENST00000463916 CREB3L4Q8TEY5 395 aa12.27□□□□□ -0.45
XRN1-203ENST00000463916 EXT2Q93063 718 aa12.27□□□□□ -0.45
XRN1-203ENST00000463916 ATOH8Q96SQ7 321 aa12.27□□□□□ -0.45
XRN1-203ENST00000463916 FAM129AQ9BZQ8 928 aa12.27□□□□□ -0.45
XRN1-203ENST00000463916 KLHL31Q9H511 634 aa12.27□□□□□ -0.45
XRN1-203ENST00000463916 ZNF160Q9HCG1 818 aa12.27□□□□□ -0.45
XRN1-203ENST00000463916 ANKHQ9HCJ1 492 aa12.27□□□□□ -0.45
XRN1-203ENST00000463916 SNX15Q9NRS6 342 aa12.27□□□□□ -0.45
XRN1-203ENST00000463916 CD274Q9NZQ7 290 aa12.27□□□□□ -0.45
XRN1-203ENST00000463916 LUZP4Q9P127 313 aa12.27□□□□□ -0.45
XRN1-203ENST00000463916 RNF112Q9ULX5 631 aa12.27□□□□□ -0.45
XRN1-203ENST00000463916 C4orf51C9J302 202 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 KLHL18O94889 574 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 WISP1O95388 367 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 HEXBP07686 556 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 C1GALT1C1LP0DN25 315 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 COX6A1P12074 109 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 ACPPP15309 386 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 ITGA3P26006 1051 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 PHBP35232 272 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 AHRP35869 848 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 HNF4AP41235 474 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 XCR1P46094 333 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 AGTR2P50052 363 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 CDC16Q13042 620 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 RBBP5Q15291 538 aaKnown RBP12.26□□□□□ -0.45
XRN1-203ENST00000463916 DEFB134Q4QY38 66 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 VWA5B1Q5TIE3 1220 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 TBC1D1Q86TI0 1168 aaPredicted RBP12.26□□□□□ -0.45
XRN1-203ENST00000463916 Q8NA96 180 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 UHMK1Q8TAS1 419 aaKnown RBP12.26□□□□□ -0.45
XRN1-203ENST00000463916 NT5CQ8TCD5 201 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 KCTD4Q8WVF5 259 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 AIF1LQ9BQI0 150 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 VN1R1Q9GZP7 353 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 C14orf105Q9NVL8 296 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 WWOXQ9NZC7 414 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 NFU1Q9UMS0 254 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 PLAAQ9Y263 795 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 ACOT9Q9Y305 439 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 PCDHGB7Q9Y5F8 929 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 UBXN8O00124 270 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 LTA4HP09960 611 aaKnown RBP12.26□□□□□ -0.45
XRN1-203ENST00000463916 ZNF888P0CJ79 500 aaPredicted RBP12.26□□□□□ -0.45
XRN1-203ENST00000463916 MTHFD2P13995 350 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 OLR1P78380 273 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 EEF1A2Q05639 463 aaKnown RBP12.26□□□□□ -0.45
XRN1-203ENST00000463916 CDKL4Q5MAI5 379 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 SULT1C3Q6IMI6 304 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 ADNP2Q6IQ32 1131 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 JMJD6Q6NYC1 403 aaPredicted RBP12.26□□□□□ -0.45
XRN1-203ENST00000463916 TMEM205Q6UW68 189 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 CEP112Q8N8E3 955 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 STAG3L4Q8TBR4 150 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 UTP15Q8TED0 518 aaKnown RBP12.26□□□□□ -0.45
XRN1-203ENST00000463916 SLC44A1Q8WWI5 657 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 SLC6A16Q9GZN6 736 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 NMRAL1Q9HBL8 299 aa12.26□□□□□ -0.45
XRN1-203ENST00000463916 IGHV1-45A0A0A0MS14 117 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 A0A1W2PQ72 361 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 GALR3O60755 368 aaPredicted RBP12.25□□□□□ -0.45
XRN1-203ENST00000463916 STK16O75716 305 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 TBX6O95947 436 aaPredicted RBP12.25□□□□□ -0.45
XRN1-203ENST00000463916 HPP00738 406 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 CELA2AP08217 269 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 ALOX12P18054 663 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 CD22P20273 847 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 GLRBP48167 497 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 RAB8AP61006 207 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 SLBPQ14493 270 aaKnown RBP eCLIP12.25□□□□□ -0.45
XRN1-203ENST00000463916 SLC6A19Q695T7 634 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 LANCL3Q6ZV70 420 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.25□□□□□ -0.45
XRN1-203ENST00000463916 TCAIMQ8N3R3 496 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 THOC3Q96J01 351 aaKnown RBP12.25□□□□□ -0.45
XRN1-203ENST00000463916 GPR78Q96P69 363 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 RBCK1Q9BYM8 510 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 TSPYL1Q9H0U9 437 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 DNAJC11Q9NVH1 559 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 ZNF490Q9ULM2 529 aaPredicted RBP12.25□□□□□ -0.45
XRN1-203ENST00000463916 G3BP2Q9UN86 482 aaKnown RBP12.25□□□□□ -0.45
XRN1-203ENST00000463916 CSAG2Q9Y5P2 127 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 LOC102723996A0A087X1L8 192 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 A0A096LPK6 155 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 IGHV3-20A0A0C4DH32 117 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 MAP2K7O14733 419 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 KERAO60938 352 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 CDC123O75794 336 aaPredicted RBP12.25□□□□□ -0.45
XRN1-203ENST00000463916 SORBS2O94875 1100 aaKnown RBP12.25□□□□□ -0.45
XRN1-203ENST00000463916 RHOXF2BP0C7M4 288 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 SMIM10L1P0DMW3 83 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 FOXK1P85037 733 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 RGS1Q08116 209 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 HERC3Q15034 1050 aa12.25□□□□□ -0.45
XRN1-203ENST00000463916 PLEKHN1Q494U1 663 aaPredicted RBP12.25□□□□□ -0.45
XRN1-203ENST00000463916 MINDY4Q4G0A6 757 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms