RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 PLOD3O60568 738 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 OR4D2P58180 307 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 HHEXQ03014 270 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 ADGRE1Q14246 886 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 ZNF678Q5SXM1 525 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 C1orf220Q5T0J3 134 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 POLR2J3Q9H1A7 115 aaKnown RBP12.4□□□□□ -0.42
NUP58-206ENST00000463407 TPK1Q9H3S4 243 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 MAN2B2Q9Y2E5 1009 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 PCDHGB5Q9Y5G0 923 aa12.4□□□□□ -0.42
NUP58-206ENST00000463407 SLC30A4O14863 429 aa12.4□□□□□ -0.43
NUP58-206ENST00000463407 SLC16A5O15375 505 aa12.4□□□□□ -0.43
NUP58-206ENST00000463407 DBIP07108 87 aaKnown RBP12.4□□□□□ -0.43
NUP58-206ENST00000463407 ETS2P15036 469 aa12.4□□□□□ -0.43
NUP58-206ENST00000463407 FAUP35544 74 aaKnown RBP12.4□□□□□ -0.43
NUP58-206ENST00000463407 LRRC26Q2I0M4 334 aa12.4□□□□□ -0.43
NUP58-206ENST00000463407 KHDC1Q4VXA5 237 aaKnown RBP12.4□□□□□ -0.43
NUP58-206ENST00000463407 CRB2Q5IJ48 1285 aa12.4□□□□□ -0.43
NUP58-206ENST00000463407 MRPL43Q8N983 215 aaKnown RBP12.4□□□□□ -0.43
NUP58-206ENST00000463407 CHST14Q8NCH0 376 aa12.4□□□□□ -0.43
NUP58-206ENST00000463407 SH3YL1Q96HL8 342 aaPredicted RBP12.4□□□□□ -0.43
NUP58-206ENST00000463407 FCRL3Q96P31 734 aaPredicted RBP12.4□□□□□ -0.43
NUP58-206ENST00000463407 TRIM2Q9C040 744 aa12.4□□□□□ -0.43
NUP58-206ENST00000463407 COQ10BQ9H8M1 238 aa12.4□□□□□ -0.43
NUP58-206ENST00000463407 DLGAP4Q9Y2H0 992 aa12.4□□□□□ -0.43
NUP58-206ENST00000463407 DAPL1A0PJW8 107 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 FAM227AF5H4B4 570 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 HRH2P25021 359 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 ITGA3P26006 1051 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 HSF2Q03933 536 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 MCFD2Q8NI22 146 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 SIGLEC10Q96LC7 697 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 DEFB126Q9BYW3 111 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 TP53I11O14683 189 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 CST5P28325 142 aaPredicted RBP12.39□□□□□ -0.43
NUP58-206ENST00000463407 IL12AP29459 219 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 GORASP1Q9BQQ3 440 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 MARK1Q9P0L2 795 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 FEZF1A0PJY2 475 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 PSMA1P25786 263 aaKnown RBP12.39□□□□□ -0.43
NUP58-206ENST00000463407 SDC2P34741 201 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 TGFBR2P37173 567 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 CXCL12P48061 93 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 XKP51811 444 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 MLLT1Q03111 559 aaPredicted RBP12.39□□□□□ -0.43
NUP58-206ENST00000463407 SLC18A2Q05940 514 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 PCLAFQ15004 111 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 DNM1P34Q6PK57 102 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 EPGNQ6UW88 154 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 LRRC46Q96FV0 321 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 IL17FQ96PD4 163 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 BRD7Q9NPI1 651 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 MS4A12Q9NXJ0 267 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 TAS2R9Q9NYW1 312 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 OARD1Q9Y530 152 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 ANXA2P2A6NMY6 339 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 APBB3O95704 486 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 ANXA2P07355 339 aaKnown RBP12.39□□□□□ -0.43
NUP58-206ENST00000463407 CD72P21854 359 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 HNRNPA2B1P22626 353 aaKnown RBP12.39□□□□□ -0.43
NUP58-206ENST00000463407 NOXRED1Q6NXP6 359 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 FBXO42Q6P3S6 717 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 C15orf39Q6ZRI6 1047 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 ADGRD2Q7Z7M1 963 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 SYVN1Q86TM6 617 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 CLIP4Q8N3C7 705 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 CSNK1A1LQ8N752 337 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 OR10G2Q8NGC3 310 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 GEMIN6Q8WXD5 167 aaKnown RBP12.39□□□□□ -0.43
NUP58-206ENST00000463407 PKP4Q99569 1192 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 CGREF1Q99674 301 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 HERPUD2Q9BSE4 406 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 KLHL31Q9H511 634 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 ALS2Q96Q42 1657 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 TRBC2A0A5B9 178 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 TBX1O43435 398 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 PSIP1O75475 530 aaKnown RBP12.39□□□□□ -0.43
NUP58-206ENST00000463407 C1GALT1C1LP0DN25 315 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 G6PDP11413 515 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 OTX2P32243 289 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 FGF13Q92913 245 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 ZIC5Q96T25 663 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 ZNF395Q9H8N7 513 aaPredicted RBP12.39□□□□□ -0.43
NUP58-206ENST00000463407 TBC1D17Q9HA65 648 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 PRODH2Q9UF12 536 aa12.39□□□□□ -0.43
NUP58-206ENST00000463407 CCNOP22674 350 aa12.38□□□□□ -0.43
NUP58-206ENST00000463407 RAB28P51157 221 aa12.38□□□□□ -0.43
NUP58-206ENST00000463407 CDK6Q00534 326 aa12.38□□□□□ -0.43
NUP58-206ENST00000463407 CHAF1BQ13112 559 aa12.38□□□□□ -0.43
NUP58-206ENST00000463407 LASP1Q14847 261 aaKnown RBP12.38□□□□□ -0.43
NUP58-206ENST00000463407 LIPJQ5W064 366 aa12.38□□□□□ -0.43
NUP58-206ENST00000463407 LYSMD4Q5XG99 296 aa12.38□□□□□ -0.43
NUP58-206ENST00000463407 GPR153Q6NV75 609 aa12.38□□□□□ -0.43
NUP58-206ENST00000463407 USP30Q70CQ3 517 aa12.38□□□□□ -0.43
NUP58-206ENST00000463407 NANOGNBQ7Z5D8 188 aa12.38□□□□□ -0.43
NUP58-206ENST00000463407 ABCB9Q9NP78 766 aa12.38□□□□□ -0.43
NUP58-206ENST00000463407 ARPC2O15144 300 aa12.38□□□□□ -0.43
NUP58-206ENST00000463407 RPS15AP62244 130 aaKnown RBP12.38□□□□□ -0.43
NUP58-206ENST00000463407 SLC10A2Q12908 348 aaPredicted RBP12.38□□□□□ -0.43
NUP58-206ENST00000463407 SMCO1Q147U7 214 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms