RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 CAPN5O15484 640 aaPredicted RBP15.31■□□□□ 0.04
SMC4-204ENST00000462787 SELPLGQ14242 412 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 SNAP47Q5SQN1 464 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 PRAMEF17Q5VTA0 474 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 AGMOQ6ZNB7 445 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 SNAPC3Q92966 411 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 PIP5K1AQ99755 562 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 LGR4Q9BXB1 951 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 MINDY3Q9H8M7 445 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 RGPD1P0DJD0 1748 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 B8ZZF3 427 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 TLL1O43897 1013 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 TRIM3O75382 744 aaPredicted RBP15.31■□□□□ 0.04
SMC4-204ENST00000462787 MPPE1Q53F39 396 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 EIPR1Q53HC9 387 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 CLEC12AQ5QGZ9 265 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 ATAT1Q5SQI0 421 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 C22orf42Q6IC83 251 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 FAM171BQ6P995 826 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 ARNTL2Q8WYA1 636 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 TTLL2Q9BWV7 592 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 GSTO2Q9H4Y5 243 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 ZBTB20Q9HC78 741 aaPredicted RBP15.31■□□□□ 0.04
SMC4-204ENST00000462787 GPR83Q9NYM4 423 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 TRAV19A0A0A6YYK7 116 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 PPEF2O14830 753 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 RPL10P27635 214 aaKnown RBP15.31■□□□□ 0.04
SMC4-204ENST00000462787 GDF5P43026 501 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 BAIAP2L2Q6UXY1 529 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 ISCA2Q86U28 154 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 TMC8Q8IU68 726 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 SNX29P2Q8IUI4 249 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 RGL4Q8IZJ4 473 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 SCAMP5Q8TAC9 235 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 SLC9A6Q92581 669 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 MRGPRX2Q96LB1 330 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 TBX5Q99593 518 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 TRIM2Q9C040 744 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 ZDHHC3Q9NYG2 299 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 RABL2AQ9UBK7 228 aaPredicted RBP15.31■□□□□ 0.04
SMC4-204ENST00000462787 GTF2IRD1Q9UHL9 959 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 OR10H1Q9Y4A9 318 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 CD52P31358 61 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 EXOC3L2Q2M3D2 409 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 QSOX2Q6ZRP7 698 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 LARP4Q71RC2 724 aaKnown RBP eCLIP15.31■□□□□ 0.041e-17■■■■□ 24.2
SMC4-204ENST00000462787 ATAD1Q8NBU5 361 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 TCEAL4Q96EI5 215 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 SLC2A13Q96QE2 648 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 CDH10Q9Y6N8 788 aa15.31■□□□□ 0.04
SMC4-204ENST00000462787 RICTORQ6R327 1708 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 KLRG2A4D1S0 409 aaPredicted RBP15.3■□□□□ 0.04
SMC4-204ENST00000462787 ACOT8O14734 319 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 KMOO15229 486 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 OR10H2O60403 315 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 RFPL3O75679 317 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 H2AFB2P0C5Z0 115 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 JUNBP17275 347 aaPredicted RBP15.3■□□□□ 0.04
SMC4-204ENST00000462787 EFR3AQ14156 821 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 GHDCQ8N2G8 530 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 SAMD12Q8N8I0 201 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 PYCR2Q96C36 320 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 BCHEP06276 602 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 BCKDHAP12694 445 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 ZNF157P51786 506 aaPredicted RBP15.3■□□□□ 0.04
SMC4-204ENST00000462787 PGGT1BP53609 377 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 CDKN2DP55273 166 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 MSANTD1Q6ZTZ1 278 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 PPP1R13LQ8WUF5 828 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 NELL2Q99435 816 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 IL37Q9NZH6 218 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 MGAT4AQ9UM21 535 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 RPS5P46782 204 aaKnown RBP15.3■□□□□ 0.04
SMC4-204ENST00000462787 SERINC3Q13530 473 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 TRAM1Q15629 374 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 PAGE3Q5JUK9 113 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 ZNF691Q5VV52 312 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 FBXL22Q6P050 247 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 PAQR7Q86WK9 346 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 THAP6Q8TBB0 222 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 CDCA5Q96FF9 252 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 IMP4Q96G21 291 aaKnown RBP15.3■□□□□ 0.04
SMC4-204ENST00000462787 TAS2R10Q9NYW0 307 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 N6AMT1Q9Y5N5 214 aa15.3■□□□□ 0.04
SMC4-204ENST00000462787 FAM170BA6NMN3 283 aa15.29■□□□□ 0.04
SMC4-204ENST00000462787 FAAHO00519 579 aa15.29■□□□□ 0.04
SMC4-204ENST00000462787 LYRM1O43325 122 aa15.29■□□□□ 0.04
SMC4-204ENST00000462787 SPATA31D3P0C874 917 aa15.29■□□□□ 0.04
SMC4-204ENST00000462787 BMP4P12644 408 aa15.29■□□□□ 0.04
SMC4-204ENST00000462787 SCAPQ12770 1279 aa15.29■□□□□ 0.04
SMC4-204ENST00000462787 NTRK2Q16620 822 aa15.29■□□□□ 0.04
SMC4-204ENST00000462787 PRPF38BQ5VTL8 546 aaKnown RBP15.29■□□□□ 0.04
SMC4-204ENST00000462787 REEP3Q6NUK4 255 aa15.29■□□□□ 0.04
SMC4-204ENST00000462787 SPATA31D4Q6ZUB0 917 aa15.29■□□□□ 0.04
SMC4-204ENST00000462787 CADM2Q8N3J6 435 aa15.29■□□□□ 0.04
SMC4-204ENST00000462787 PARP16Q8N5Y8 322 aa15.29■□□□□ 0.04
SMC4-204ENST00000462787 KLRG1Q96E93 195 aa15.29■□□□□ 0.04
SMC4-204ENST00000462787 FUBP3Q96I24 572 aaKnown RBP eCLIP15.29■□□□□ 0.04
SMC4-204ENST00000462787 TRIB3Q96RU7 358 aa15.29■□□□□ 0.04
SMC4-204ENST00000462787 TRPV4Q9HBA0 871 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms