RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 THEMIS2Q5TEJ8 643 aa10.91□□□□□ -0.66
PCCB-203ENST00000462542 NIPAL1Q6NVV3 410 aa10.91□□□□□ -0.66
PCCB-203ENST00000462542 RGS9BPQ6ZS82 235 aa10.91□□□□□ -0.66
PCCB-203ENST00000462542 PRSS41Q7RTY9 318 aa10.91□□□□□ -0.66
PCCB-203ENST00000462542 VN1R4Q7Z5H5 301 aa10.91□□□□□ -0.66
PCCB-203ENST00000462542 PLD3Q8IV08 490 aa10.91□□□□□ -0.66
PCCB-203ENST00000462542 FBXO15Q8NCQ5 510 aaPredicted RBP10.91□□□□□ -0.66
PCCB-203ENST00000462542 ACRBPQ8NEB7 543 aa10.91□□□□□ -0.66
PCCB-203ENST00000462542 PPHLN1Q8NEY8 458 aaKnown RBP10.91□□□□□ -0.66
PCCB-203ENST00000462542 CREB3L4Q8TEY5 395 aa10.91□□□□□ -0.66
PCCB-203ENST00000462542 ZNF480Q8WV37 535 aa10.91□□□□□ -0.66
PCCB-203ENST00000462542 C18orf12Q96KH6 178 aa10.91□□□□□ -0.66
PCCB-203ENST00000462542 BIRC8Q96P09 236 aa10.91□□□□□ -0.66
PCCB-203ENST00000462542 TCF12Q99081 682 aa10.91□□□□□ -0.66
PCCB-203ENST00000462542 DEFB126Q9BYW3 111 aa10.91□□□□□ -0.66
PCCB-203ENST00000462542 CHRAC1Q9NRG0 131 aa10.91□□□□□ -0.66
PCCB-203ENST00000462542 LANCL2Q9NS86 450 aa10.91□□□□□ -0.66
PCCB-203ENST00000462542 MARCH4Q9P2E8 410 aaPredicted RBP10.91□□□□□ -0.66
PCCB-203ENST00000462542 GTF3C3Q9Y5Q9 886 aa10.91□□□□□ -0.66
PCCB-203ENST00000462542 DUSP10Q9Y6W6 482 aa10.91□□□□□ -0.66
PCCB-203ENST00000462542 SCN3AQ9NY46 2000 aa10.91□□□□□ -0.66
PCCB-203ENST00000462542 FEZF1A0PJY2 475 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 FAM171A2A8MVW0 826 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 FAM47E-STBD1D6RA91 191 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 E7EVH7 732 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 BCKDKO14874 412 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 MFAP3LO75121 409 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 PDE9AO76083 593 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 ESR1P03372 595 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 FHP07954 510 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 JAK1P23458 1154 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 ACVR2AP27037 513 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 FMO4P31512 558 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 RFC3P40938 356 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 GDF10P55107 478 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 ADARP55265 1226 aaKnown RBP10.9□□□□□ -0.66
PCCB-203ENST00000462542 SNRPNP63162 240 aaKnown RBP10.9□□□□□ -0.66
PCCB-203ENST00000462542 HERC3Q15034 1050 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 SLC25A35Q3KQZ1 300 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 MRNIPQ6NTE8 343 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 CAVIN1Q6NZI2 390 aaKnown RBP10.9□□□□□ -0.66
PCCB-203ENST00000462542 B3GNT6Q6ZMB0 384 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 KIAA0408Q6ZU52 694 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 CNGA4Q8IV77 575 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 ZZZ3Q8IYH5 903 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 RPRMLQ8N4K4 120 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 KIF2BQ8N4N8 673 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 OR52N2Q8NGI0 321 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 SLC35B2Q8TB61 432 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 SLC13A3Q8WWT9 602 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 TBC1D20Q96BZ9 403 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 PEX11GQ96HA9 241 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 TTYH2Q9BSA4 534 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 DEFB127Q9H1M4 99 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 ETNK1Q9HBU6 452 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 TIMMDC1Q9NPL8 285 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 PLEKHA6Q9Y2H5 1048 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 NAALAD2Q9Y3Q0 740 aa10.9□□□□□ -0.66
PCCB-203ENST00000462542 NSD1Q96L73 2696 aaPredicted RBP10.9□□□□□ -0.67
PCCB-203ENST00000462542 FIGNL2A6NMB9 653 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 NPIPA2E9PIF3 369 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 NPIPA3F8WFD2 350 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 SYT5O00445 386 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 ZBTB14O43829 449 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 RDH16O75452 317 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 CDC123O75794 336 aaPredicted RBP10.89□□□□□ -0.67
PCCB-203ENST00000462542 INHBBP09529 407 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 GLI4P10075 376 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 ADSLP30566 484 aaPredicted RBP10.89□□□□□ -0.67
PCCB-203ENST00000462542 GRIA1P42261 906 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 SPA17Q15506 151 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 ACSBG2Q5FVE4 666 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 CTSL3PQ5NE16 218 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 RNF187Q5TA31 235 aaPredicted RBP10.89□□□□□ -0.67
PCCB-203ENST00000462542 AADACL2Q6P093 401 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 CDC20BQ86Y33 519 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 PDSS2Q86YH6 399 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 LRRC56Q8IYG6 542 aaPredicted RBP10.89□□□□□ -0.67
PCCB-203ENST00000462542 SHISA5Q8N114 240 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 CYP4X1Q8N118 509 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 CYP4Z2PQ8N1L4 340 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 TMEM156Q8N614 296 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 KCT2Q8NC54 265 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 PPFIBP2Q8ND30 876 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 SPATA3Q8NHX4 192 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 TSLPQ969D9 159 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 LRRC46Q96FV0 321 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 PTCHD1Q96NR3 888 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 MACROD1Q9BQ69 325 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 GPATCH1Q9BRR8 931 aaKnown RBP10.89□□□□□ -0.67
PCCB-203ENST00000462542 PCBD2Q9H0N5 130 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 CLK4Q9HAZ1 481 aaKnown RBP10.89□□□□□ -0.67
PCCB-203ENST00000462542 ABCF3Q9NUQ8 709 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 PCDHA13Q9Y5I0 950 aa10.89□□□□□ -0.67
PCCB-203ENST00000462542 SAGE2PA6NJ88 616 aa10.88□□□□□ -0.67
PCCB-203ENST00000462542 GFYI3L273 518 aa10.88□□□□□ -0.67
PCCB-203ENST00000462542 ACOT7O00154 380 aa10.88□□□□□ -0.67
PCCB-203ENST00000462542 AP3B1O00203 1094 aa10.88□□□□□ -0.67
PCCB-203ENST00000462542 NIPSNAP2O75323 286 aa10.88□□□□□ -0.67
PCCB-203ENST00000462542 SYF2O95926 243 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms