RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 SGPP1Q9BX95 441 aa13.67□□□□□ -0.22
DNMT3A-207ENST00000461228 NPIPA1Q9UND3 350 aa13.67□□□□□ -0.22
DNMT3A-207ENST00000461228 CRYL1Q9Y2S2 319 aa13.67□□□□□ -0.22
DNMT3A-207ENST00000461228 DHRS7Q9Y394 339 aa13.67□□□□□ -0.22
DNMT3A-207ENST00000461228 FLNAP21333 2647 aaKnown RBP13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 ZNF407Q9C0G0 2248 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 IGKV3D-11A0A0A0MRZ8 115 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 IGHV3-20A0A0C4DH32 117 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 SAGE2PA6NJ88 616 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 A8MUI8 341 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 FAM227AF5H4B4 570 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 H7BY64 318 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 C8GP07360 202 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 FHP07954 510 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 SNRPB2P08579 225 aaKnown RBP13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 MGAT1P26572 445 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 CHRNB4P30926 498 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 HLCSP50747 726 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 SNRPNP63162 240 aaKnown RBP13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 TFF3Q07654 80 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 THEMIS2Q5TEJ8 643 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 MFSD4BQ5TF39 518 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 LCTLQ6UWM7 567 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 PPFIBP2Q8ND30 876 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 C16orf52Q8NHV5 167 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 FAM57AQ8TBR7 257 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 CALML6Q8TD86 181 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 C1orf54Q8WWF1 131 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 TMEM125Q96AQ2 219 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 TBC1D20Q96BZ9 403 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 CCDC138Q96M89 665 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 PRAP1Q96NZ9 151 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 HES7Q9BYE0 225 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 CCDC68Q9H2F9 335 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 KLHL1Q9NR64 748 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 HOMER3Q9NSC5 361 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 HCN3Q9P1Z3 774 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 TNFRSF10DQ9UBN6 386 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 KCNN3Q9UGI6 736 aa13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 PPIEQ9UNP9 301 aaKnown RBP13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 NSD1Q96L73 2696 aaPredicted RBP13.66□□□□□ -0.22
DNMT3A-207ENST00000461228 MAP1AP78559 2803 aaPredicted RBP13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 MAGEB16A2A368 324 aa13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 FCHO1O14526 889 aa13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 SLC16A5O15375 505 aa13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 GALR3O60755 368 aaPredicted RBP13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 RDH16O75452 317 aa13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 ETS1P14921 441 aa13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 TFEBP19484 476 aa13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 MSX1P28360 303 aa13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 ZNF75DP51815 510 aa13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 OC90Q02509 493 aaPredicted RBP13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 TMEM211Q6ICI0 200 aa13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 SPINK14Q6IE38 97 aa13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 MEX3BQ6ZN04 569 aaKnown RBP13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 KIAA0408Q6ZU52 694 aa13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 FGD2Q7Z6J4 655 aa13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 C17orf64Q86WR6 236 aa13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 RPS19BP1Q86WX3 136 aaKnown RBP13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 PLD3Q8IV08 490 aa13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 ZFP62Q8NB50 900 aaPredicted RBP13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 NINJ1Q92982 152 aa13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 SLC30A3Q99726 388 aa13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 HAUS8Q9BT25 410 aa13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 TP63Q9H3D4 680 aaPredicted RBP13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 XAB2Q9HCS7 855 aaKnown RBP13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 SAMD15Q9P1V8 674 aa13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 GALPQ9UBC7 116 aa13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 PPT2Q9UMR5 302 aa13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 NAALAD2Q9Y3Q0 740 aa13.65□□□□□ -0.22
DNMT3A-207ENST00000461228 TCRBV16S1A1N1A0A5B0 115 aa13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 SGK494L7N484 410 aa13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 NDC80O14777 642 aa13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 WISP2O76076 250 aa13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 TPP2P29144 1249 aaPredicted RBP13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 MAGEA3P43357 314 aa13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 AP1S2P56377 157 aa13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 MLF1P58340 268 aa13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 KRTAP10-9P60411 292 aa13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 TSTA3Q13630 321 aaPredicted RBP13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 FCRLBQ6BAA4 426 aa13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 CAPN13Q6MZZ7 669 aaPredicted RBP13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 ARHGAP11AQ6P4F7 1023 aa13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 CYHR1Q6ZMK1 362 aa13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 UBE2R2Q712K3 238 aaPredicted RBP13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 ZNF227Q86WZ6 799 aa13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 GPALPP1Q8IXQ4 340 aa13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 MFSD9Q8NBP5 474 aa13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 OR4K1Q8NGD4 311 aa13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 NT5CQ8TCD5 201 aa13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 SLC13A3Q8WWT9 602 aa13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 SDCCAG3Q96C92 435 aa13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 CXXC4Q9H2H0 198 aa13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 HRNRQ86YZ3 2850 aaPredicted RBP13.64□□□□□ -0.23
DNMT3A-207ENST00000461228 VPS13CQ709C8 3753 aa13.63□□□□□ -0.23
DNMT3A-207ENST00000461228 ZCWPW2A0A1B0GU75 182 aa13.63□□□□□ -0.23
DNMT3A-207ENST00000461228 TRBC2A0A5B9 178 aa13.63□□□□□ -0.23
DNMT3A-207ENST00000461228 GOLGA8KD6RF30 607 aa13.63□□□□□ -0.23
DNMT3A-207ENST00000461228 GOLGA8TH3BQL2 631 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms