RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 ATP1A1-AS1Q5TC04 95 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 MARC1Q5VT66 337 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 PRR27Q6MZM9 219 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 CTR9Q6PD62 1173 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 REG3GQ6UW15 175 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 IGFL3Q6UXB1 125 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 GET4Q7L5D6 327 aaPredicted RBP1.92□□□□□ -2.1
SYPL1-203ENST00000460770 CCDC91Q7Z6B0 441 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 SLFN11Q7Z7L1 901 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 DNAAF5Q86Y56 855 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 LINC00346Q8IVM7 164 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 THNSL1Q8IYQ7 743 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 MAML2Q8IZL2 1156 aaPredicted RBP1.92□□□□□ -2.1
SYPL1-203ENST00000460770 C11orf42Q8N5U0 333 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 ZNF713Q8N859 430 aaPredicted RBP1.92□□□□□ -2.1
SYPL1-203ENST00000460770 POMGNT2Q8NAT1 580 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 APPL2Q8NEU8 664 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 TSPAN14Q8NG11 270 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 OR6J1Q8NGC5 347 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 OR10Q1Q8NGQ4 319 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 BADQ92934 168 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 VPS33AQ96AX1 596 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 SLC22A18Q96BI1 424 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 MOB3AQ96BX8 217 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 PHYHIPLQ96FC7 376 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 FAM71F1Q96KD3 344 aaPredicted RBP1.92□□□□□ -2.1
SYPL1-203ENST00000460770 BTBD9Q96Q07 612 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 MRPL1Q9BYD6 325 aaKnown RBP1.92□□□□□ -2.1
SYPL1-203ENST00000460770 STRADBQ9C0K7 418 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 SP140LQ9H930 580 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 SLC35C2Q9NQQ7 365 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 HACD3Q9P035 362 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 MORF4L1Q9UBU8 362 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 DDX25Q9UHL0 483 aaKnown RBP1.92□□□□□ -2.1
SYPL1-203ENST00000460770 CPSF3Q9UKF6 684 aaKnown RBP1.92□□□□□ -2.1
SYPL1-203ENST00000460770 SNX5Q9Y5X3 404 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 NPHP3Q7Z494 1330 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 HCFC1P51610 2035 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 IGHV3-20A0A0C4DH32 117 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 hCG_1809904A0A1W2PP81 198 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 A0A1W2PPE2 198 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 A0A1W2PR64 198 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 TMEM129A0AVI4 362 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 FAM168BA1KXE4 195 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 TRIM64A6NGJ6 449 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 TRIM64BA6NI03 449 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 NKX6-3A6NJ46 265 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 ARHGEF33A8MVX0 844 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 F8VVB4 439 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 F8VWA3 439 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 SNX3O60493 162 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 CYTIPO60759 359 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 SLU7O95391 586 aaKnown RBP1.91□□□□□ -2.1
SYPL1-203ENST00000460770 BCL10O95999 233 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 MT-ND1P03886 318 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 SAGP10523 405 aaPredicted RBP1.91□□□□□ -2.1
SYPL1-203ENST00000460770 TRIM21P19474 475 aaKnown RBP1.91□□□□□ -2.1
SYPL1-203ENST00000460770 EEF1DP29692 281 aaKnown RBP1.91□□□□□ -2.1
SYPL1-203ENST00000460770 MAPK12P53778 367 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 RAD23AP54725 363 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 IGLV3-21P80748 117 aaPredicted RBP1.91□□□□□ -2.1
SYPL1-203ENST00000460770 PPP2R5CQ13362 524 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 CAMK2DQ13557 499 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 TRA2AQ13595 282 aaKnown RBP eCLIP1.91□□□□□ -2.1
SYPL1-203ENST00000460770 VEZF1Q14119 521 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 COG2Q14746 738 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 ZNF79Q15937 498 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 SNAPC1Q16533 368 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 NTRK2Q16620 822 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 KYNUQ16719 465 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 GPR33Q49SQ1 333 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 CBWD6Q4V339 395 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 CBWD3Q5JTY5 395 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 KRBOX4Q5JUW0 171 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 C9orf66Q5T8R8 295 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 DMKNQ6E0U4 476 aaPredicted RBP1.91□□□□□ -2.1
SYPL1-203ENST00000460770 PRSS55Q6UWB4 352 aaPredicted RBP1.91□□□□□ -2.1
SYPL1-203ENST00000460770 FAM43BQ6ZT52 329 aaPredicted RBP1.91□□□□□ -2.1
SYPL1-203ENST00000460770 KBTBD6Q86V97 674 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 ZSCAN30Q86W11 494 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 RCOR2Q8IZ40 523 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 OR8H3Q8N146 312 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 TCEANCQ8N8B7 351 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 ARL10Q8N8L6 244 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 POGLUT1Q8NBL1 392 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 MSANTD4Q8NCY6 345 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 OR10S1Q8NGN2 331 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 GOT1L1Q8NHS2 421 aaPredicted RBP1.91□□□□□ -2.1
SYPL1-203ENST00000460770 AFAP1L1Q8TED9 768 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 PRPF31Q8WWY3 499 aaKnown RBP1.91□□□□□ -2.1
SYPL1-203ENST00000460770 PGAP3Q96FM1 320 aaPredicted RBP1.91□□□□□ -2.1
SYPL1-203ENST00000460770 SIPA1Q96FS4 1042 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 GBP5Q96PP8 586 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 GCNAQ96QF7 691 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 DESI2Q9BSY9 194 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 TEX13BQ9BXU2 312 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 EDEM3Q9BZQ6 932 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 MOB1AQ9H8S9 216 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 Q9H8V8 135 aa1.91□□□□□ -2.1
SYPL1-203ENST00000460770 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms