RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 KLHL18O94889 574 aa21.75■■□□□ 1.07
PTPN4-208ENST00000460289 S100BP04271 92 aaPredicted RBP21.75■■□□□ 1.07
PTPN4-208ENST00000460289 SLC35E2BP0CK96 405 aa21.75■■□□□ 1.07
PTPN4-208ENST00000460289 C1GALT1C1LP0DN25 315 aa21.75■■□□□ 1.07
PTPN4-208ENST00000460289 ALOX12P18054 663 aa21.75■■□□□ 1.07
PTPN4-208ENST00000460289 XCR1P46094 333 aa21.75■■□□□ 1.07
PTPN4-208ENST00000460289 CDC16Q13042 620 aa21.75■■□□□ 1.07
PTPN4-208ENST00000460289 EFTUD2Q15029 972 aaKnown RBP eCLIP21.75■■□□□ 1.07
PTPN4-208ENST00000460289 C18orf21Q32NC0 220 aaPredicted RBP21.75■■□□□ 1.07
PTPN4-208ENST00000460289 SLC6A19Q695T7 634 aa21.75■■□□□ 1.07
PTPN4-208ENST00000460289 FAAH2Q6GMR7 532 aa21.75■■□□□ 1.07
PTPN4-208ENST00000460289 TMEM205Q6UW68 189 aa21.75■■□□□ 1.07
PTPN4-208ENST00000460289 CMC1Q7Z7K0 106 aa21.75■■□□□ 1.07
PTPN4-208ENST00000460289 PDSS2Q86YH6 399 aa21.75■■□□□ 1.07
PTPN4-208ENST00000460289 KBTBD2Q8IY47 623 aa21.75■■□□□ 1.07
PTPN4-208ENST00000460289 AFAP1L2Q8N4X5 818 aa21.75■■□□□ 1.07
PTPN4-208ENST00000460289 CEP112Q8N8E3 955 aa21.75■■□□□ 1.07
PTPN4-208ENST00000460289 MIB2Q96AX9 1013 aa21.75■■□□□ 1.07
PTPN4-208ENST00000460289 MOCOSQ96EN8 888 aa21.75■■□□□ 1.07
PTPN4-208ENST00000460289 MESP1Q9BRJ9 268 aa21.75■■□□□ 1.07
PTPN4-208ENST00000460289 DNAJC11Q9NVH1 559 aa21.75■■□□□ 1.07
PTPN4-208ENST00000460289 NINJ2Q9NZG7 142 aa21.75■■□□□ 1.07
PTPN4-208ENST00000460289 HCN3Q9P1Z3 774 aa21.75■■□□□ 1.07
PTPN4-208ENST00000460289 ACOT9Q9Y305 439 aa21.75■■□□□ 1.07
PTPN4-208ENST00000460289 LOC102723996A0A087X1L8 192 aa21.74■■□□□ 1.07
PTPN4-208ENST00000460289 IGHV1-45A0A0A0MS14 117 aa21.74■■□□□ 1.07
PTPN4-208ENST00000460289 TAPBPO15533 448 aa21.74■■□□□ 1.07
PTPN4-208ENST00000460289 GALR3O60755 368 aaPredicted RBP21.74■■□□□ 1.07
PTPN4-208ENST00000460289 RDH16O75452 317 aa21.74■■□□□ 1.07
PTPN4-208ENST00000460289 STK16O75716 305 aa21.74■■□□□ 1.07
PTPN4-208ENST00000460289 SORBS2O94875 1100 aaKnown RBP21.74■■□□□ 1.07
PTPN4-208ENST00000460289 LTA4HP09960 611 aaKnown RBP21.74■■□□□ 1.07
PTPN4-208ENST00000460289 C8orf89P0DMQ9 161 aa21.74■■□□□ 1.07
PTPN4-208ENST00000460289 COX6A1P12074 109 aa21.74■■□□□ 1.07
PTPN4-208ENST00000460289 VARSP26640 1264 aaKnown RBP21.74■■□□□ 1.07
PTPN4-208ENST00000460289 MINDY4Q4G0A6 757 aa21.74■■□□□ 1.07
PTPN4-208ENST00000460289 MFSD4BQ5TF39 518 aa21.74■■□□□ 1.07
PTPN4-208ENST00000460289 MROH9Q5TGP6 573 aa21.74■■□□□ 1.07
PTPN4-208ENST00000460289 SLCO4C1Q6ZQN7 724 aa21.74■■□□□ 1.07
PTPN4-208ENST00000460289 ISCA2Q86U28 154 aa21.74■■□□□ 1.07
PTPN4-208ENST00000460289 ATCAYQ86WG3 371 aa21.74■■□□□ 1.07
PTPN4-208ENST00000460289 KRT78Q8N1N4 520 aa21.74■■□□□ 1.07
PTPN4-208ENST00000460289 EFCAB3Q8N7B9 438 aa21.74■■□□□ 1.07
PTPN4-208ENST00000460289 ANKRD53Q8N9V6 530 aa21.74■■□□□ 1.07
PTPN4-208ENST00000460289 PDPRQ8NCN5 879 aa21.74■■□□□ 1.07
PTPN4-208ENST00000460289 TTLQ8NG68 377 aa21.74■■□□□ 1.07
PTPN4-208ENST00000460289 CPT1CQ8TCG5 803 aa21.74■■□□□ 1.07
PTPN4-208ENST00000460289 MRRFQ96E11 262 aaKnown RBP21.74■■□□□ 1.07
PTPN4-208ENST00000460289 FMO2Q99518 471 aa21.74■■□□□ 1.07
PTPN4-208ENST00000460289 PITHD1Q9GZP4 211 aaPredicted RBP21.74■■□□□ 1.07
PTPN4-208ENST00000460289 VN1R1Q9GZP7 353 aa21.74■■□□□ 1.07
PTPN4-208ENST00000460289 ACSS3Q9H6R3 686 aa21.74■■□□□ 1.07
PTPN4-208ENST00000460289 CLK4Q9HAZ1 481 aaKnown RBP21.74■■□□□ 1.07
PTPN4-208ENST00000460289 RIC8BQ9NVN3 520 aa21.74■■□□□ 1.07
PTPN4-208ENST00000460289 PTBP2Q9UKA9 531 aaKnown RBP21.74■■□□□ 1.07
PTPN4-208ENST00000460289 B3GNT3Q9Y2A9 372 aa21.74■■□□□ 1.07
PTPN4-208ENST00000460289 NUP210LQ5VU65 1888 aa21.73■■□□□ 1.07
PTPN4-208ENST00000460289 CLGNO14967 610 aa21.73■■□□□ 1.07
PTPN4-208ENST00000460289 SERPINA6P08185 405 aa21.73■■□□□ 1.07
PTPN4-208ENST00000460289 ICAM2P13598 275 aa21.73■■□□□ 1.07
PTPN4-208ENST00000460289 TFEBP19484 476 aa21.73■■□□□ 1.07
PTPN4-208ENST00000460289 GSTM2P28161 218 aa21.73■■□□□ 1.07
PTPN4-208ENST00000460289 CD97P48960 835 aa21.73■■□□□ 1.07
PTPN4-208ENST00000460289 AP2B1P63010 937 aa21.73■■□□□ 1.07
PTPN4-208ENST00000460289 Q0VFX4 171 aa21.73■■□□□ 1.07
PTPN4-208ENST00000460289 UAP1Q16222 522 aaPredicted RBP21.73■■□□□ 1.07
PTPN4-208ENST00000460289 DEFB134Q4QY38 66 aa21.73■■□□□ 1.07
PTPN4-208ENST00000460289 TMIGD1Q6UXZ0 262 aa21.73■■□□□ 1.07
PTPN4-208ENST00000460289 OR1F2PQ96R84 312 aa21.73■■□□□ 1.07
PTPN4-208ENST00000460289 TMEM79Q9BSE2 394 aa21.73■■□□□ 1.07
PTPN4-208ENST00000460289 ZNF700Q9H0M5 742 aa21.73■■□□□ 1.07
PTPN4-208ENST00000460289 EHD1Q9H4M9 534 aa21.73■■□□□ 1.07
PTPN4-208ENST00000460289 ALG9Q9H6U8 611 aa21.73■■□□□ 1.07
PTPN4-208ENST00000460289 NT5DC2Q9H857 520 aa21.73■■□□□ 1.07
PTPN4-208ENST00000460289 C19orf25Q9UFG5 118 aaPredicted RBP21.73■■□□□ 1.07
PTPN4-208ENST00000460289 PLAAQ9Y263 795 aa21.73■■□□□ 1.07
PTPN4-208ENST00000460289 A0A087X1B8 175 aa21.72■■□□□ 1.07
PTPN4-208ENST00000460289 CCDC189A1A4V9 331 aa21.72■■□□□ 1.07
PTPN4-208ENST00000460289 JRKO75564 520 aa21.72■■□□□ 1.07
PTPN4-208ENST00000460289 ZIC2O95409 532 aaPredicted RBP21.72■■□□□ 1.07
PTPN4-208ENST00000460289 SERPINA7P05543 415 aa21.72■■□□□ 1.07
PTPN4-208ENST00000460289 HSPA7P48741 367 aa21.72■■□□□ 1.07
PTPN4-208ENST00000460289 EEF1A2Q05639 463 aaKnown RBP21.72■■□□□ 1.07
PTPN4-208ENST00000460289 PLEKHN1Q494U1 663 aaPredicted RBP21.72■■□□□ 1.07
PTPN4-208ENST00000460289 IGFL2Q6UWQ7 119 aa21.72■■□□□ 1.07
PTPN4-208ENST00000460289 RIPOR1Q6ZS17 1223 aa21.72■■□□□ 1.07
PTPN4-208ENST00000460289 SEC16BQ96JE7 1060 aa21.72■■□□□ 1.07
PTPN4-208ENST00000460289 LMF1Q96S06 567 aa21.72■■□□□ 1.07
PTPN4-208ENST00000460289 TUBB6Q9BUF5 446 aa21.72■■□□□ 1.07
PTPN4-208ENST00000460289 FUT8Q9BYC5 575 aa21.72■■□□□ 1.07
PTPN4-208ENST00000460289 SLC6A16Q9GZN6 736 aa21.72■■□□□ 1.07
PTPN4-208ENST00000460289 CDC42EP4Q9H3Q1 356 aaKnown RBP21.72■■□□□ 1.07
PTPN4-208ENST00000460289 EPS8L2Q9H6S3 715 aa21.72■■□□□ 1.07
PTPN4-208ENST00000460289 ZBTB20Q9HC78 741 aaPredicted RBP21.72■■□□□ 1.07
PTPN4-208ENST00000460289 NUDT4Q9NZJ9 180 aa21.72■■□□□ 1.07
PTPN4-208ENST00000460289 KERAO60938 352 aa21.71■■□□□ 1.07
PTPN4-208ENST00000460289 C2P06681 752 aa21.71■■□□□ 1.07
PTPN4-208ENST00000460289 ZNF888P0CJ79 500 aaPredicted RBP21.71■■□□□ 1.07
PTPN4-208ENST00000460289 KCNC1P48547 511 aa21.71■■□□□ 1.07
PTPN4-208ENST00000460289 DLG1Q12959 904 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms