RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 MAGEA12P43365 314 aa19.66■□□□□ 0.74
VARS-218ENST00000459667 SLBPQ14493 270 aaKnown RBP eCLIP19.66■□□□□ 0.74
VARS-218ENST00000459667 ACAP2Q15057 778 aa19.66■□□□□ 0.74
VARS-218ENST00000459667 LRRC70Q7Z2Q7 622 aa19.66■□□□□ 0.74
VARS-218ENST00000459667 ZC3H7AQ8IWR0 971 aaKnown RBP19.66■□□□□ 0.74
VARS-218ENST00000459667 CLEC1AQ8NC01 280 aa19.66■□□□□ 0.74
VARS-218ENST00000459667 TRPV3Q8NET8 790 aa19.66■□□□□ 0.74
VARS-218ENST00000459667 UBTD2Q8WUN7 234 aa19.66■□□□□ 0.74
VARS-218ENST00000459667 CCDC77Q9BR77 488 aa19.66■□□□□ 0.74
VARS-218ENST00000459667 TXLNGYQ9BZA5 131 aa19.66■□□□□ 0.74
VARS-218ENST00000459667 CD244Q9BZW8 370 aa19.66■□□□□ 0.74
VARS-218ENST00000459667 TGIF2Q9GZN2 237 aa19.66■□□□□ 0.74
VARS-218ENST00000459667 ANKZF1Q9H8Y5 726 aa19.66■□□□□ 0.74
VARS-218ENST00000459667 FBXL4Q9UKA2 621 aa19.66■□□□□ 0.74
VARS-218ENST00000459667 G3BP2Q9UN86 482 aaKnown RBP19.66■□□□□ 0.74
VARS-218ENST00000459667 ASB1Q9Y576 335 aa19.66■□□□□ 0.74
VARS-218ENST00000459667 SCN3AQ9NY46 2000 aa19.66■□□□□ 0.74
VARS-218ENST00000459667 CFAP46Q8IYW2 2715 aa19.66■□□□□ 0.74
VARS-218ENST00000459667 A6NL46 340 aa19.65■□□□□ 0.74
VARS-218ENST00000459667 TRIM49D1C9J1S8 452 aa19.65■□□□□ 0.74
VARS-218ENST00000459667 SGK494L7N484 410 aa19.65■□□□□ 0.74
VARS-218ENST00000459667 RDH16O75452 317 aa19.65■□□□□ 0.74
VARS-218ENST00000459667 KLHL18O94889 574 aa19.65■□□□□ 0.74
VARS-218ENST00000459667 HERC3Q15034 1050 aa19.65■□□□□ 0.74
VARS-218ENST00000459667 ASB18Q6ZVZ8 466 aa19.65■□□□□ 0.74
VARS-218ENST00000459667 LAPTM4BQ86VI4 370 aa19.65■□□□□ 0.74
VARS-218ENST00000459667 PDSS2Q86YH6 399 aa19.65■□□□□ 0.74
VARS-218ENST00000459667 KRT78Q8N1N4 520 aa19.65■□□□□ 0.74
VARS-218ENST00000459667 VPS50Q96JG6 964 aa19.65■□□□□ 0.74
VARS-218ENST00000459667 GPR78Q96P69 363 aa19.65■□□□□ 0.74
VARS-218ENST00000459667 EHD1Q9H4M9 534 aa19.65■□□□□ 0.74
VARS-218ENST00000459667 HCN3Q9P1Z3 774 aa19.65■□□□□ 0.74
VARS-218ENST00000459667 NAALAD2Q9Y3Q0 740 aa19.65■□□□□ 0.74
VARS-218ENST00000459667 SPTA1P02549 2419 aa19.65■□□□□ 0.74
VARS-218ENST00000459667 BOD1L1Q8NFC6 3051 aa19.65■□□□□ 0.74
VARS-218ENST00000459667 IDSB3KWA1 339 aa19.64■□□□□ 0.73
VARS-218ENST00000459667 MASP2O00187 686 aa19.64■□□□□ 0.73
VARS-218ENST00000459667 PDGFAP04085 211 aa19.64■□□□□ 0.73
VARS-218ENST00000459667 HEXBP07686 556 aa19.64■□□□□ 0.73
VARS-218ENST00000459667 MYBL2P10244 700 aa19.64■□□□□ 0.73
VARS-218ENST00000459667 MTHFD2P13995 350 aa19.64■□□□□ 0.73
VARS-218ENST00000459667 ALOX12P18054 663 aa19.64■□□□□ 0.73
VARS-218ENST00000459667 DEKP35659 375 aaKnown RBP19.64■□□□□ 0.73
VARS-218ENST00000459667 AGTR2P50052 363 aa19.64■□□□□ 0.73
VARS-218ENST00000459667 PGDP52209 483 aa19.64■□□□□ 0.73
VARS-218ENST00000459667 EMP2P54851 167 aa19.64■□□□□ 0.73
VARS-218ENST00000459667 TUBB8Q3ZCM7 444 aa19.64■□□□□ 0.73
VARS-218ENST00000459667 XKR6Q5GH73 641 aa19.64■□□□□ 0.73
VARS-218ENST00000459667 KIRREL2Q6UWL6 708 aa19.64■□□□□ 0.73
VARS-218ENST00000459667 TMIGD1Q6UXZ0 262 aa19.64■□□□□ 0.73
VARS-218ENST00000459667 ABHD13Q7L211 337 aa19.64■□□□□ 0.73
VARS-218ENST00000459667 PRICKLE2Q7Z3G6 844 aa19.64■□□□□ 0.73
VARS-218ENST00000459667 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.64■□□□□ 0.73
VARS-218ENST00000459667 PLD6Q8N2A8 252 aaKnown RBP19.64■□□□□ 0.73
VARS-218ENST00000459667 AFAP1L2Q8N4X5 818 aa19.64■□□□□ 0.73
VARS-218ENST00000459667 FDCSPQ8NFU4 85 aa19.64■□□□□ 0.73
VARS-218ENST00000459667 TTLQ8NG68 377 aa19.64■□□□□ 0.73
VARS-218ENST00000459667 PTCD3Q96EY7 689 aaKnown RBP19.64■□□□□ 0.73
VARS-218ENST00000459667 MLXIPLQ9NP71 852 aa19.64■□□□□ 0.73
VARS-218ENST00000459667 GPR83Q9NYM4 423 aa19.64■□□□□ 0.73
VARS-218ENST00000459667 OPTCQ9UBM4 332 aa19.64■□□□□ 0.73
VARS-218ENST00000459667 BSNQ9UPA5 3926 aa19.64■□□□□ 0.73
VARS-218ENST00000459667 TNRC6AQ8NDV7 1962 aaKnown RBP19.63■□□□□ 0.73
VARS-218ENST00000459667 URADA6NGE7 173 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 ZNF860A6NHJ4 632 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 MAP2K7O14733 419 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 SLC28A2O43868 658 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 ALOX12BO75342 701 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 SNRPAP09012 282 aaKnown RBP19.63■□□□□ 0.73
VARS-218ENST00000459667 ZNF888P0CJ79 500 aaPredicted RBP19.63■□□□□ 0.73
VARS-218ENST00000459667 GFAPP14136 432 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 ACPPP15309 386 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 GCAP28676 217 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 XCR1P46094 333 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 SKP1P63208 163 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 RAPSNQ13702 412 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 SLC29A2Q14542 456 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 DEFB134Q4QY38 66 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 TECRLQ5HYJ1 363 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 GALNT16Q8N428 558 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 OR11G2Q8NGC1 345 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 OR51Q1Q8NH59 317 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 CREB3L4Q8TEY5 395 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 UBLCP1Q8WVY7 318 aaPredicted RBP19.63■□□□□ 0.73
VARS-218ENST00000459667 MESP1Q9BRJ9 268 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 EFCAB11Q9BUY7 163 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 NUDT9Q9BW91 350 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 SLC6A16Q9GZN6 736 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 PITHD1Q9GZP4 211 aaPredicted RBP19.63■□□□□ 0.73
VARS-218ENST00000459667 NT5DC2Q9H857 520 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 ATP13A2Q9NQ11 1180 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 COPG2Q9UBF2 871 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 FETUBQ9UGM5 382 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 MKL2Q9ULH7 1088 aa19.63■□□□□ 0.73
VARS-218ENST00000459667 K7EPI3 171 aa19.62■□□□□ 0.73
VARS-218ENST00000459667 GALR3O60755 368 aaPredicted RBP19.62■□□□□ 0.73
VARS-218ENST00000459667 PRAMEF4O60810 478 aa19.62■□□□□ 0.73
VARS-218ENST00000459667 JRKO75564 520 aa19.62■□□□□ 0.73
VARS-218ENST00000459667 BMP10O95393 424 aa19.62■□□□□ 0.73
VARS-218ENST00000459667 SERPINA6P08185 405 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms