RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 ZER1Q7Z7L7 766 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 ADAMTS19Q8TE59 1207 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 PIGBQ92521 554 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 MED18Q9BUE0 208 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 FBXO6Q9NRD1 293 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-204ENST00000455883 LYRM2Q9NU23 88 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-204ENST00000455883 ZFR2Q9UPR6 939 aaKnown RBP5.07□□□□□ -1.6
CSMD3-204ENST00000455883 GRM6O15303 877 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 EPORP19235 508 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 SELENOVP59797 346 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 PLIN5Q00G26 463 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 PEA15Q15121 130 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 MTFR2Q6P444 385 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 KCTD20Q7Z5Y7 419 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 POU5F2Q8N7G0 328 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 CPT1BQ92523 772 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 SUSD6Q92537 303 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 MAELQ96JY0 434 aaKnown RBP5.07□□□□□ -1.6
CSMD3-204ENST00000455883 FUZQ9BT04 418 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 TAPBPLQ9BX59 468 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF350Q9GZX5 532 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 CMAHPQ9Y471 501 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 NWD2Q9ULI1 1742 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 A0A096LPI6 279 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 SLC12A8A0AV02 714 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 H7C1Q1 480 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 MT-ND1P03886 318 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 ELFN1P0C7U0 828 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 UBL4AP11441 157 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 HSD17B1P14061 328 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 JUPP14923 745 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 PEX2P28328 305 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 HBG1P69891 147 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 HBG2P69892 147 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 NKX6-1P78426 367 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-204ENST00000455883 FAM122CQ6P4D5 195 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 UNC5AQ6ZN44 842 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 CMTM1Q8IZ96 169 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 ARNTL2Q8WYA1 636 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 OR8D1Q8WZ84 308 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 NINJ1Q92982 152 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 ASB8Q9H765 288 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 PCDHGA8Q9Y5G5 932 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 KIAA0355O15063 1070 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 C2P06681 752 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 TBPP20226 339 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 ZIK1Q3SY52 487 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-204ENST00000455883 B3GLCTQ6Y288 498 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 NOXA1Q86UR1 476 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 B3GNT7Q8NFL0 401 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 OR2T33Q8NG76 320 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 IL4I1Q96RQ9 567 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 SLC25A21Q9BQT8 299 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-204ENST00000455883 CRTAC1Q9NQ79 661 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 C19orf25Q9UFG5 118 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-204ENST00000455883 NDUFB9Q9Y6M9 179 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 RALGAPA2Q2PPJ7 1873 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.07□□□□□ -1.6
CSMD3-204ENST00000455883 CXCR6O00574 342 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 DVL1O14640 695 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 RGS11O94810 467 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 SLC34A2O95436 690 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 CPSF4O95639 269 aaKnown RBP5.07□□□□□ -1.6
CSMD3-204ENST00000455883 DIRAS3O95661 229 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 CRYZL1O95825 349 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 RAB40ALP0C0E4 278 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 STAG3L2P0CL84 134 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 CYP4B1P13584 511 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 GRM5P41594 1212 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 DVL1P1P54792 670 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-204ENST00000455883 TIGD3Q6B0B8 471 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 OR2L2Q8NH16 312 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 RAET1EQ8TD07 263 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 RAB40AQ8WXH6 277 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 RGMAQ96B86 450 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 RAD9AQ99638 391 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 PRODH2Q9UF12 536 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 C4AP0C0L4 1744 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 C4BP0C0L5 1744 aa5.07□□□□□ -1.6
CSMD3-204ENST00000455883 MMP20O60882 483 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 BANF1O75531 89 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 OAS1P00973 400 aaKnown RBP5.06□□□□□ -1.6
CSMD3-204ENST00000455883 MAP3K8P41279 467 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 ARSFP54793 590 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 RIN1Q13671 783 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 MGAT5BQ3V5L5 792 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 TOR1AIP1Q5JTV8 583 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 PPTC7Q8NI37 304 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 STT3BQ8TCJ2 826 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 TMEM143Q96AN5 459 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 PIGMQ9H3S5 423 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 CCM2LQ9NUG4 571 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-204ENST00000455883 HACL1Q9UJ83 578 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 MOSPD1Q9UJG1 213 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 PHF24Q9UPV7 400 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 JAG2Q9Y219 1238 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 DOT1LQ8TEK3 1739 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 LINC00854A0A1B0GVQ3 168 aa5.06□□□□□ -1.6
CSMD3-204ENST00000455883 BHMG1C9JSJ3 638 aaPredicted RBP5.06□□□□□ -1.6
CSMD3-204ENST00000455883 NUDT14O95848 222 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms