RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 DSG4Q86SJ6 1040 aa14.48□□□□□ -0.09
LDLR-202ENST00000455727 OR4A15Q8NGL6 344 aa14.48□□□□□ -0.09
LDLR-202ENST00000455727 SMARCD2Q92925 531 aa14.48□□□□□ -0.09
LDLR-202ENST00000455727 MTERF3Q96E29 417 aa14.48□□□□□ -0.09
LDLR-202ENST00000455727 ZFYVE19Q96K21 471 aa14.48□□□□□ -0.09
LDLR-202ENST00000455727 HDAC8Q9BY41 377 aa14.48□□□□□ -0.09
LDLR-202ENST00000455727 MYNNQ9NPC7 610 aa14.48□□□□□ -0.09
LDLR-202ENST00000455727 JRKO75564 520 aa14.48□□□□□ -0.09
LDLR-202ENST00000455727 FKBP9O95302 570 aa14.48□□□□□ -0.09
LDLR-202ENST00000455727 DAPP51397 102 aa14.48□□□□□ -0.09
LDLR-202ENST00000455727 PHEXP78562 749 aa14.48□□□□□ -0.09
LDLR-202ENST00000455727 HPCAP84074 193 aa14.48□□□□□ -0.09
LDLR-202ENST00000455727 GAB1Q13480 694 aa14.48□□□□□ -0.09
LDLR-202ENST00000455727 GTF2IRD2BQ6EKJ0 949 aa14.48□□□□□ -0.09
LDLR-202ENST00000455727 GTF2IRD2Q86UP8 949 aa14.48□□□□□ -0.09
LDLR-202ENST00000455727 HORMAD1Q86X24 394 aa14.48□□□□□ -0.09
LDLR-202ENST00000455727 METTL4Q8N3J2 472 aa14.48□□□□□ -0.09
LDLR-202ENST00000455727 C11orf65Q8NCR3 313 aa14.48□□□□□ -0.09
LDLR-202ENST00000455727 RAD51AP1Q96B01 352 aa14.48□□□□□ -0.09
LDLR-202ENST00000455727 COX14Q96I36 57 aa14.48□□□□□ -0.09
LDLR-202ENST00000455727 C7orf34Q96L11 122 aa14.48□□□□□ -0.09
LDLR-202ENST00000455727 OR52A5Q9H2C5 316 aa14.48□□□□□ -0.09
LDLR-202ENST00000455727 ADPRHL2Q9NX46 363 aa14.48□□□□□ -0.09
LDLR-202ENST00000455727 CHD7Q9P2D1 2997 aa14.48□□□□□ -0.09
LDLR-202ENST00000455727 C2orf16Q68DN1 1984 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 hCG_2039718K7EN88 272 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 SLC1A7O00341 560 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 NOL3O60936 208 aaKnown RBP14.47□□□□□ -0.09
LDLR-202ENST00000455727 HTR1AP08908 422 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 FURINP09958 794 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 EFNA1P20827 205 aaPredicted RBP14.47□□□□□ -0.09
LDLR-202ENST00000455727 CRYBA2P53672 197 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 CXCR4P61073 352 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 CDK5R2Q13319 367 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 ELOAQ14241 798 aaKnown RBP14.47□□□□□ -0.09
LDLR-202ENST00000455727 NFE2L1Q14494 772 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 ZNF385BQ569K4 471 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 LCTLQ6UWM7 567 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 ADAMTSL4Q6UY14 1074 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 BARD1Q99728 777 aaKnown RBP14.47□□□□□ -0.09
LDLR-202ENST00000455727 REEP1Q9H902 201 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 PRM3Q9NNZ6 103 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 OBP2AQ9NY56 170 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 FAF1Q9UNN5 650 aaPredicted RBP14.47□□□□□ -0.09
LDLR-202ENST00000455727 PADI2Q9Y2J8 665 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 MYO1GB0I1T2 1018 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 C1QTNF3-AMACRE9PGA6 284 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 PLK4O00444 970 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 SUV39H1O43463 412 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 GPR37L1O60883 481 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 TGFB1P01137 390 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 NUDT7P0C024 238 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 MATN1P21941 496 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 KELP23276 732 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 PTX3P26022 381 aaPredicted RBP14.47□□□□□ -0.09
LDLR-202ENST00000455727 MVDP53602 400 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 KCNJ10P78508 379 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 RBBP4Q09028 425 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 PDGFRLQ15198 375 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 FAM71E1Q6IPT2 247 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 ARHGAP22Q7Z5H3 698 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 GALNT10Q86SR1 603 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 PDZD3Q86UT5 571 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 NAGSQ8N159 534 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 CXorf40AQ8TE69 158 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 C16orf78Q8WTQ4 265 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 SUSD6Q92537 303 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 EPYCQ99645 322 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 DOHHQ9BU89 302 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 LHPPQ9H008 270 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 OCEL1Q9H607 264 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 SAMHD1Q9Y3Z3 626 aaKnown RBP14.47□□□□□ -0.09
LDLR-202ENST00000455727 PCDHGB1Q9Y5G3 927 aa14.47□□□□□ -0.09
LDLR-202ENST00000455727 KIF26AQ9ULI4 1882 aaPredicted RBP14.46□□□□□ -0.09
LDLR-202ENST00000455727 MITFO75030 526 aaPredicted RBP14.46□□□□□ -0.09
LDLR-202ENST00000455727 KLHL18O94889 574 aa14.46□□□□□ -0.09
LDLR-202ENST00000455727 AGXTP21549 392 aa14.46□□□□□ -0.09
LDLR-202ENST00000455727 P2RY2P41231 377 aa14.46□□□□□ -0.09
LDLR-202ENST00000455727 HBA1P69905 142 aa14.46□□□□□ -0.09
LDLR-202ENST00000455727 TSTA3Q13630 321 aaPredicted RBP14.46□□□□□ -0.09
LDLR-202ENST00000455727 RAPSNQ13702 412 aa14.46□□□□□ -0.09
LDLR-202ENST00000455727 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.46□□□□□ -0.09
LDLR-202ENST00000455727 FAHD1Q6P587 224 aa14.46□□□□□ -0.09
LDLR-202ENST00000455727 CRTC3Q6UUV7 619 aa14.46□□□□□ -0.09
LDLR-202ENST00000455727 TMC5Q6UXY8 1006 aa14.46□□□□□ -0.09
LDLR-202ENST00000455727 IKBIPQ70UQ0 350 aa14.46□□□□□ -0.09
LDLR-202ENST00000455727 C12orf76Q8N812 135 aaPredicted RBP14.46□□□□□ -0.09
LDLR-202ENST00000455727 RAB2BQ8WUD1 216 aa14.46□□□□□ -0.09
LDLR-202ENST00000455727 NODALQ96S42 347 aa14.46□□□□□ -0.09
LDLR-202ENST00000455727 PDP1Q9P0J1 537 aaPredicted RBP14.46□□□□□ -0.09
LDLR-202ENST00000455727 TNFRSF21O75509 655 aa14.46□□□□□ -0.1
LDLR-202ENST00000455727 C9P02748 559 aa14.46□□□□□ -0.1
LDLR-202ENST00000455727 JUNDP17535 347 aa14.46□□□□□ -0.1
LDLR-202ENST00000455727 ITIH1P19827 911 aa14.46□□□□□ -0.1
LDLR-202ENST00000455727 EMP3P54852 163 aa14.46□□□□□ -0.1
LDLR-202ENST00000455727 SELENOWP63302 87 aa14.46□□□□□ -0.1
LDLR-202ENST00000455727 FCHO2Q0JRZ9 810 aa14.46□□□□□ -0.1
LDLR-202ENST00000455727 C2orf80Q0P641 193 aa14.46□□□□□ -0.1
LDLR-202ENST00000455727 ARHGAP19Q14CB8 494 aa14.46□□□□□ -0.1
LDLR-202ENST00000455727 PRAMEF14Q5SWL7 426 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms