RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 WASH4PA8MWX3 477 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 FAM47E-STBD1D6RA91 191 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 POP7O75817 140 aaKnown RBP10.78□□□□□ -0.68
DDR1-240ENST00000454612 PAK4O96013 591 aaPredicted RBP10.78□□□□□ -0.68
DDR1-240ENST00000454612 MLLT1Q03111 559 aaPredicted RBP10.78□□□□□ -0.68
DDR1-240ENST00000454612 RNASE12Q5GAN4 147 aaKnown RBP10.78□□□□□ -0.68
DDR1-240ENST00000454612 PSRC1Q6PGN9 363 aaPredicted RBP10.78□□□□□ -0.68
DDR1-240ENST00000454612 OR10G6Q8NH81 332 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 OR5K1Q8NHB7 308 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 WDR36Q8NI36 951 aaKnown RBP10.78□□□□□ -0.68
DDR1-240ENST00000454612 PHF21AQ96BD5 680 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 DNAJA3Q96EY1 480 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 WDR12Q9GZL7 423 aaKnown RBP10.78□□□□□ -0.68
DDR1-240ENST00000454612 MED16Q9Y2X0 877 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 DOCK6Q96HP0 2047 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 UNC80Q8N2C7 3258 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 ASPDHA6ND91 283 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 ISM1B1AKI9 464 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 TULP3O75386 442 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 ACP5P13686 325 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 HTR1EP28566 365 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 CSRP3P50461 194 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 PTPN5P54829 565 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 TIAL1Q01085 375 aaKnown RBP eCLIP10.78□□□□□ -0.68
DDR1-240ENST00000454612 NFE2L1Q14494 772 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 SF3B4Q15427 424 aaKnown RBP eCLIP10.78□□□□□ -0.683e-6■■■□□ 15.9
DDR1-240ENST00000454612 CAPN13Q6MZZ7 669 aaPredicted RBP10.78□□□□□ -0.68
DDR1-240ENST00000454612 ZSWIM9Q86XI8 627 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 FAR1Q8WVX9 515 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 KLF16Q9BXK1 252 aaPredicted RBP10.78□□□□□ -0.68
DDR1-240ENST00000454612 N6AMT1Q9Y5N5 214 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 AIREO43918 545 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 CACNG3O60359 315 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 MED26O95402 600 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 EBLN1P0CF75 366 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 ENDOUP21128 410 aaKnown RBP10.78□□□□□ -0.68
DDR1-240ENST00000454612 LHCGRP22888 699 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 DGKGP49619 791 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 RAB8AP61006 207 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 TYSND1Q2T9J0 566 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 SOWAHCQ53LP3 525 aaPredicted RBP10.78□□□□□ -0.68
DDR1-240ENST00000454612 ZC3H12BQ5HYM0 836 aaKnown RBP10.78□□□□□ -0.68
DDR1-240ENST00000454612 C11orf65Q8NCR3 313 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 OR9Q2Q8NGE9 314 aa10.78□□□□□ -0.68
DDR1-240ENST00000454612 CARS2Q9HA77 564 aaKnown RBP10.78□□□□□ -0.68
DDR1-240ENST00000454612 HIDE1A8MVS5 230 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 ZNF99A8MXY4 864 aaPredicted RBP10.77□□□□□ -0.69
DDR1-240ENST00000454612 J3KTA2 159 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 ADAM23O75077 832 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 GGT1P19440 569 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 KDELR2P33947 212 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 SSR2P43308 183 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 RPL26P61254 145 aaKnown RBP10.77□□□□□ -0.69
DDR1-240ENST00000454612 TXNL4AP83876 142 aaKnown RBP10.77□□□□□ -0.69
DDR1-240ENST00000454612 RUNX1T1Q06455 604 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 CD300CQ08708 224 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 MOGQ16653 247 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 CEP78Q5JTW2 689 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 CEP68Q76N32 757 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 ZNF551Q7Z340 670 aaPredicted RBP10.77□□□□□ -0.69
DDR1-240ENST00000454612 WDR53Q7Z5U6 358 aaPredicted RBP10.77□□□□□ -0.69
DDR1-240ENST00000454612 LGI4Q8N135 537 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 SMG7Q92540 1137 aaKnown RBP10.77□□□□□ -0.69
DDR1-240ENST00000454612 TOP1MTQ969P6 601 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 ARMC1Q9NVT9 282 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 TAS2R16Q9NYV7 291 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 INTS6Q9UL03 887 aaKnown RBP10.77□□□□□ -0.69
DDR1-240ENST00000454612 ERVK-11Q9UQG0 969 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 IGLV3-10A0A075B6K4 115 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 GNB5O14775 395 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 MATN4O95460 622 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 BCHEP06276 602 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 PRKACAP17612 351 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 RAB14P61106 215 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 RPP38P78345 283 aaKnown RBP10.77□□□□□ -0.69
DDR1-240ENST00000454612 ID2Q02363 134 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 NKG7Q16617 165 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 RALGAPA2Q2PPJ7 1873 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 SPANXN2Q5MJ10 180 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 ZNF362Q5T0B9 420 aaPredicted RBP10.77□□□□□ -0.69
DDR1-240ENST00000454612 MED27Q6P2C8 311 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 CASP12Q6UXS9 341 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 EIF3MQ7L2H7 374 aaKnown RBP10.77□□□□□ -0.69
DDR1-240ENST00000454612 C16orf62Q7Z3J2 963 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 TMEM179BQ7Z7N9 219 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 MMP21Q8N119 569 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 HUS1BQ8NHY5 278 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 LRRC20Q8TCA0 184 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 SIPA1Q96FS4 1042 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 TRIB3Q96RU7 358 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 FEVQ99581 238 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 CNPPD1Q9BV87 410 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 TVP23BQ9NYZ1 205 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 DNAJC27Q9NZQ0 273 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 HCFC2Q9Y5Z7 792 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 ERN1O75460 977 aaKnown RBP10.77□□□□□ -0.69
DDR1-240ENST00000454612 TSPAN12O95859 305 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 IGHA2P01877 340 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 FUCA1P04066 466 aa10.77□□□□□ -0.69
DDR1-240ENST00000454612 ITIH1P19827 911 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms