RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 C16orf52Q8NHV5 167 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 RND1Q92730 232 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 TBC1D20Q96BZ9 403 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 FOXC2Q99958 501 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 ZNF559Q9BR84 538 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 TMUB1Q9BVT8 246 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 SARGQ9BW04 601 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 TRIM5Q9C035 493 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 CCDC68Q9H2F9 335 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 CDCP1Q9H5V8 836 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 PLSCR2Q9NRY7 297 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 LANCL2Q9NS86 450 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 SOX13Q9UN79 622 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 EDARQ9UNE0 448 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 ZKSCAN5Q9Y2L8 839 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 CRYL1Q9Y2S2 319 aa13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 REXO2Q9Y3B8 237 aaKnown RBP13.41□□□□□ -0.26
LYSMD3-202ENST00000453259 TPOP07202 933 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 FHP07954 510 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 HOXD4P09016 255 aaPredicted RBP13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 CD99P14209 185 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 TPP2P29144 1249 aaPredicted RBP13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 IMPA1P29218 277 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 MLF1P58340 268 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 CRADDP78560 199 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 FOLH1Q04609 750 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 PWP1Q13610 501 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 TERF2Q15554 542 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 RNFT1Q5M7Z0 435 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 CAPN13Q6MZZ7 669 aaPredicted RBP13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 PAOXQ6QHF9 649 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 PRSS41Q7RTY9 318 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 STRA8Q7Z7C7 330 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 CD163Q86VB7 1156 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 C17orf64Q86WR6 236 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 PLD3Q8IV08 490 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 LMNTD2Q8IXW0 634 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 CLYBLQ8N0X4 340 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 AFAP1L2Q8N4X5 818 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 CPSF7Q8N684 471 aaKnown RBP13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 PRELID2Q8N945 189 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 ZFP62Q8NB50 900 aaPredicted RBP13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 PPFIBP2Q8ND30 876 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 SLC13A3Q8WWT9 602 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 MFSD3Q96ES6 412 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 CCDC138Q96M89 665 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 PACSIN2Q9UNF0 486 aaPredicted RBP13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 NAALAD2Q9Y3Q0 740 aa13.4□□□□□ -0.26
LYSMD3-202ENST00000453259 SYNDIG1LA6NDD5 238 aa13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 MAN1A2O60476 641 aa13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 RDH16O75452 317 aa13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 TOXO94900 526 aa13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 SYF2O95926 243 aaKnown RBP13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 FTCDO95954 541 aa13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 TPSB2P20231 275 aa13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 RPL22P35268 128 aaKnown RBP13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 PEX19P40855 299 aa13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 TBPL1P62380 186 aa13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 BASP1P80723 227 aaKnown RBP13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 SARNPP82979 210 aaKnown RBP13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 HSF1Q00613 529 aa13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 SP140Q13342 867 aa13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 TPSAB1Q15661 275 aa13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 CCNG2Q16589 344 aa13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 BBS9Q3SYG4 887 aa13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 NEPROQ6NW34 567 aa13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 C3P1Q6ZMU1 363 aa13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 QSOX2Q6ZRP7 698 aa13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 NCCRP1Q6ZVX7 275 aaPredicted RBP13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 PDSS2Q86YH6 399 aa13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 SLC13A5Q86YT5 568 aaPredicted RBP13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 TBC1D19Q8N5T2 526 aa13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 FAM136AQ96C01 138 aa13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 NPDC1Q9NQX5 325 aaPredicted RBP13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 TSR3Q9UJK0 312 aaKnown RBP13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 SPG11Q96JI7 2443 aa13.39□□□□□ -0.27
LYSMD3-202ENST00000453259 A0A1B0GTH9 108 aa13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 MAGEB16A2A368 324 aa13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 SAGE2PA6NJ88 616 aa13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 GALR3O60755 368 aaPredicted RBP13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 TFEBP19484 476 aa13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 DNAJA1P31689 397 aaKnown RBP13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 PTGER1P34995 402 aa13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 MEOX1P50221 254 aa13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 ITGA8P53708 1063 aa13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 RGS9BPQ6ZS82 235 aa13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 KIAA0408Q6ZU52 694 aa13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 UBE2R2Q712K3 238 aaPredicted RBP13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 CENPUQ71F23 418 aa13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 TMEM200AQ86VY9 491 aa13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 ZNF227Q86WZ6 799 aa13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 GPALPP1Q8IXQ4 340 aa13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 RNF10Q8N5U6 811 aaKnown RBP13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 MFSD9Q8NBP5 474 aa13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 KCT2Q8NC54 265 aa13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 ARMC2Q8NEN0 867 aa13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 ZCCHC10Q8TBK6 192 aa13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 PEX11GQ96HA9 241 aa13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 HAUS8Q9BT25 410 aa13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 SYBUQ9NX95 663 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms