RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 ST6GALNAC3Q8NDV1 305 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 PYROXD1Q8WU10 500 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 HAS2Q92819 552 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 NEIL2Q969S2 332 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 IMMP1LQ96LU5 166 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 C5orf34Q96MH7 638 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 OR4K3Q96R72 315 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 SARGQ9BW04 601 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 RHOJQ9H4E5 214 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 TXNDC16Q9P2K2 825 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 PLEKHB1Q9UF11 243 aaPredicted RBP12.18□□□□□ -0.46
CHD3-206ENST00000452447 KCNE2Q9Y6J6 123 aa12.18□□□□□ -0.46
CHD3-206ENST00000452447 TRAV17A0A0B4J275 112 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 IGHV3-20A0A0C4DH32 117 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 NPEPPSL1A6NEC2 478 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 ZNF860A6NHJ4 632 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 SEC24DO94855 1032 aaPredicted RBP12.17□□□□□ -0.46
CHD3-206ENST00000452447 ITGAMP11215 1152 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 IL10P22301 178 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 TNFSF10P50591 281 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 EFNA3P52797 238 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 TAS2R39P59534 338 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 MRPS25P82663 173 aaKnown RBP12.17□□□□□ -0.46
CHD3-206ENST00000452447 ILF2Q12905 390 aaKnown RBP12.17□□□□□ -0.46
CHD3-206ENST00000452447 PPP1R3AQ16821 1122 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 BTBD16Q32M84 506 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 C4orf17Q53FE4 359 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 NIPAL1Q6NVV3 410 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 THOC6Q86W42 341 aaKnown RBP12.17□□□□□ -0.46
CHD3-206ENST00000452447 PDSS2Q86YH6 399 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 ZNF740Q8NDX6 193 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 SUN3Q8TAQ9 357 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 CDKL2Q92772 493 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 MOCOSQ96EN8 888 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 PEX11GQ96HA9 241 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 TSNARE1Q96NA8 513 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 AIF1LQ9BQI0 150 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 ERP44Q9BS26 406 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 DPH5Q9H2P9 285 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 GPAMQ9HCL2 828 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 STMN3Q9NZ72 180 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 CTNNAL1Q9UBT7 734 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 ZFP69BQ9UJL9 534 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 ERRFI1Q9UJM3 462 aaPredicted RBP12.17□□□□□ -0.46
CHD3-206ENST00000452447 IKZF3Q9UKT9 509 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 SLC22A14Q9Y267 594 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 SLC5A6Q9Y289 635 aa12.17□□□□□ -0.46
CHD3-206ENST00000452447 PCNX1Q96RV3 2341 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 OR2W5A6NFC9 320 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 FAM187AA6NFU0 413 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 URADA6NGE7 173 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 A8MUI8 341 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 CDC7O00311 574 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 CDC123O75794 336 aaPredicted RBP12.16□□□□□ -0.46
CHD3-206ENST00000452447 WDPCPO95876 746 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 F10P00742 488 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 MYBL2P10244 700 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 EDN3P14138 238 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 ALOX12P18054 663 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 AHRP35869 848 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 HNMTP50135 292 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 ZNF33BQ06732 778 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 ACTN3Q08043 901 aaPredicted RBP12.16□□□□□ -0.46
CHD3-206ENST00000452447 NSDHLQ15738 373 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 DEFB134Q4QY38 66 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 ABHD13Q7L211 337 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 TMPRSS11BQ86T26 416 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 ADAMTSL2Q86TH1 951 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 BCORP1Q8N888 145 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 TRPV3Q8NET8 790 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 SPATA4Q8NEY3 305 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 OR1F2PQ96R84 312 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 RBCK1Q9BYM8 510 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 SAYSD1Q9NPB0 183 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 OLAHQ9NV23 265 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 WHRNQ9P202 907 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 OARD1Q9Y530 152 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 UNC79Q9P2D8 2635 aa12.16□□□□□ -0.46
CHD3-206ENST00000452447 A1L4Q6 167 aa12.15□□□□□ -0.46
CHD3-206ENST00000452447 FANCGO15287 622 aa12.15□□□□□ -0.46
CHD3-206ENST00000452447 GALR3O60755 368 aaPredicted RBP12.15□□□□□ -0.46
CHD3-206ENST00000452447 RNF224P0DH78 156 aa12.15□□□□□ -0.46
CHD3-206ENST00000452447 JAK1P23458 1154 aa12.15□□□□□ -0.46
CHD3-206ENST00000452447 SSTR1P30872 391 aa12.15□□□□□ -0.46
CHD3-206ENST00000452447 SCTRP47872 440 aa12.15□□□□□ -0.46
CHD3-206ENST00000452447 CDKL1Q00532 357 aa12.15□□□□□ -0.46
CHD3-206ENST00000452447 POU4F1Q01851 419 aa12.15□□□□□ -0.46
CHD3-206ENST00000452447 ABRAXAS2Q15018 415 aa12.15□□□□□ -0.46
CHD3-206ENST00000452447 RBBP5Q15291 538 aaKnown RBP12.15□□□□□ -0.46
CHD3-206ENST00000452447 TSNQ15631 228 aaKnown RBP12.15□□□□□ -0.46
CHD3-206ENST00000452447 EXT1Q16394 746 aa12.15□□□□□ -0.46
CHD3-206ENST00000452447 PLAG1Q6DJT9 500 aa12.15□□□□□ -0.46
CHD3-206ENST00000452447 ANKRD37Q7Z713 158 aa12.15□□□□□ -0.46
CHD3-206ENST00000452447 CEP97Q8IW35 865 aa12.15□□□□□ -0.46
CHD3-206ENST00000452447 SHISA5Q8N114 240 aa12.15□□□□□ -0.46
CHD3-206ENST00000452447 AFAP1L2Q8N4X5 818 aa12.15□□□□□ -0.46
CHD3-206ENST00000452447 OR5T3Q8NGG3 340 aa12.15□□□□□ -0.46
CHD3-206ENST00000452447 NT5CQ8TCD5 201 aa12.15□□□□□ -0.46
CHD3-206ENST00000452447 ANKRD49Q8WVL7 239 aa12.15□□□□□ -0.46
CHD3-206ENST00000452447 TBC1D20Q96BZ9 403 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms