RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 NDUFS4O43181 175 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 UGDHO60701 494 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 CRCPO75575 148 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 STK17BO94768 372 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 OR4F21O95013 312 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 MED26O95402 600 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 ESRRBO95718 433 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 NTRK1P04629 796 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 SERPIND1P05546 499 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 ENO1P06733 434 aaKnown RBP12.42□□□□□ -0.42
VPS33A-202ENST00000451053 CHRNGP07510 517 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 PCNAP12004 261 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 DRD4P21917 467 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 AHRP35869 848 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 HNF4AP41235 474 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 GABPB1Q06547 395 aaPredicted RBP12.42□□□□□ -0.42
VPS33A-202ENST00000451053 GRM7Q14831 915 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 CPSF6Q16630 551 aaKnown RBP eCLIP12.42□□□□□ -0.42
VPS33A-202ENST00000451053 HIST2H2ACQ16777 129 aaPredicted RBP12.42□□□□□ -0.42
VPS33A-202ENST00000451053 TBC1D25Q3MII6 688 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 HIST2H2AA3Q6FI13 130 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 MED27Q6P2C8 311 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 LAS2Q8IYD9 372 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 ARHGEF39Q8N4T4 335 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 DTWD1Q8N5C7 304 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 TTC29Q8NA56 475 aaPredicted RBP12.42□□□□□ -0.42
VPS33A-202ENST00000451053 SLC38A9Q8NBW4 561 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 OR7G3Q8NG95 312 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 CREB3L4Q8TEY5 395 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 AGAP11Q8TF27 550 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 SLC13A3Q8WWT9 602 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 C10orf90Q96M02 699 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 CCT8L2Q96SF2 557 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 SHCBP1LQ9BZQ2 653 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 SPRY4Q9C004 299 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 C20orf27Q9GZN8 174 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 FAM107BQ9H098 131 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 ACTR5Q9H9F9 607 aaPredicted RBP12.42□□□□□ -0.42
VPS33A-202ENST00000451053 TNFRSF12AQ9NP84 129 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 MID1IP1Q9NPA3 183 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 PFDN4Q9NQP4 134 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 THSD1Q9NS62 852 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 VTI1BQ9UEU0 232 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 TRPS1Q9UHF7 1281 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 MRPS2Q9Y399 296 aaKnown RBP12.42□□□□□ -0.42
VPS33A-202ENST00000451053 PCDHB3Q9Y5E6 796 aa12.42□□□□□ -0.42
VPS33A-202ENST00000451053 HYKKA2RU49 373 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 NDUFAB1O14561 156 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 CPNE3O75131 537 aaKnown RBP12.41□□□□□ -0.42
VPS33A-202ENST00000451053 DLGAP3O95886 979 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 CHEK2O96017 543 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 FGF4P08620 206 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 ARRB2P32121 409 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 HYAL2Q12891 473 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 ZRSR2Q15696 482 aaKnown RBP12.41□□□□□ -0.42
VPS33A-202ENST00000451053 GGTA1PQ4G0N0 100 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 SH2D4BQ5SQS7 431 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 ATG14Q6ZNE5 492 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 TIPARPQ7Z3E1 657 aaKnown RBP12.41□□□□□ -0.42
VPS33A-202ENST00000451053 RNF175Q8N4F7 328 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 ZNF781Q8N8C0 355 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 CDYL2Q8N8U2 506 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 KCT2Q8NC54 265 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 CAMKVQ8NCB2 501 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 GALNT6Q8NCL4 622 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 TRPV3Q8NET8 790 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 ZCCHC10Q8TBK6 192 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 NT5CQ8TCD5 201 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 BCAS4Q8TDM0 211 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 CCT6BQ92526 530 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 UBE2E3Q969T4 207 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 ZNF578Q96N58 590 aaPredicted RBP12.41□□□□□ -0.42
VPS33A-202ENST00000451053 KCNA7Q96RP8 456 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 NDC1Q9BTX1 674 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 AICDAQ9GZX7 198 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 RHBGQ9H310 441 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 CUTCQ9NTM9 273 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 KLHL14Q9P2G3 628 aa12.41□□□□□ -0.42
VPS33A-202ENST00000451053 DHCR7Q9UBM7 475 aaKnown RBP12.41□□□□□ -0.42
VPS33A-202ENST00000451053 TMEM184BQ9Y519 407 aaPredicted RBP12.41□□□□□ -0.42
VPS33A-202ENST00000451053 CACNA1AO00555 2505 aa12.4□□□□□ -0.42
VPS33A-202ENST00000451053 ANKDD1BA6NHY2 528 aa12.4□□□□□ -0.42
VPS33A-202ENST00000451053 TRPC5OSA6NMA1 111 aa12.4□□□□□ -0.42
VPS33A-202ENST00000451053 C1QTNF9BB2RNN3 333 aa12.4□□□□□ -0.42
VPS33A-202ENST00000451053 C4orf51C9J302 202 aa12.4□□□□□ -0.42
VPS33A-202ENST00000451053 H0YIV9 168 aa12.4□□□□□ -0.42
VPS33A-202ENST00000451053 TXNDC9O14530 226 aa12.4□□□□□ -0.42
VPS33A-202ENST00000451053 AZIN1O14977 448 aa12.4□□□□□ -0.42
VPS33A-202ENST00000451053 CLEC3AO75596 197 aa12.4□□□□□ -0.42
VPS33A-202ENST00000451053 TBX6O95947 436 aaPredicted RBP12.4□□□□□ -0.42
VPS33A-202ENST00000451053 SLC35G6P0C7Q6 338 aa12.4□□□□□ -0.42
VPS33A-202ENST00000451053 C1QTNF9P0C862 333 aa12.4□□□□□ -0.42
VPS33A-202ENST00000451053 NEK2P51955 445 aa12.4□□□□□ -0.42
VPS33A-202ENST00000451053 RGS1Q08116 209 aa12.4□□□□□ -0.42
VPS33A-202ENST00000451053 PWP1Q13610 501 aa12.4□□□□□ -0.42
VPS33A-202ENST00000451053 DDX39BQ13838 428 aaKnown RBP12.4□□□□□ -0.42
VPS33A-202ENST00000451053 TCHHL1Q5QJ38 904 aaPredicted RBP12.4□□□□□ -0.42
VPS33A-202ENST00000451053 GKAP1Q5VSY0 366 aaPredicted RBP12.4□□□□□ -0.42
VPS33A-202ENST00000451053 C1orf189Q5VU69 101 aa12.4□□□□□ -0.42
VPS33A-202ENST00000451053 RHBDD2Q6NTF9 364 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms