RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 EIF2S1P05198 315 aaKnown RBP16.25■□□□□ 0.19
PRPF40A-204ENST00000450303 CMPK1P30085 196 aa16.25■□□□□ 0.19
PRPF40A-204ENST00000450303 PGDP52209 483 aa16.25■□□□□ 0.19
PRPF40A-204ENST00000450303 ARSFP54793 590 aa16.25■□□□□ 0.19
PRPF40A-204ENST00000450303 RAPSNQ13702 412 aa16.25■□□□□ 0.19
PRPF40A-204ENST00000450303 SSPNQ14714 243 aa16.25■□□□□ 0.19
PRPF40A-204ENST00000450303 PFKFB4Q16877 469 aa16.25■□□□□ 0.19
PRPF40A-204ENST00000450303 WASHC2DQ5SRD0 308 aa16.25■□□□□ 0.19
PRPF40A-204ENST00000450303 MRPL14Q6P1L8 145 aaKnown RBP16.25■□□□□ 0.19
PRPF40A-204ENST00000450303 OR4N4Q8N0Y3 316 aa16.25■□□□□ 0.19
PRPF40A-204ENST00000450303 TTC29Q8NA56 475 aaPredicted RBP16.25■□□□□ 0.19
PRPF40A-204ENST00000450303 FDCSPQ8NFU4 85 aa16.25■□□□□ 0.19
PRPF40A-204ENST00000450303 SMPDL3AQ92484 453 aa16.25■□□□□ 0.19
PRPF40A-204ENST00000450303 DPH7Q9BTV6 452 aa16.25■□□□□ 0.19
PRPF40A-204ENST00000450303 C12orf65Q9H3J6 166 aaKnown RBP16.25■□□□□ 0.19
PRPF40A-204ENST00000450303 CCDC134Q9H6E4 229 aa16.25■□□□□ 0.19
PRPF40A-204ENST00000450303 HEATR5BQ9P2D3 2071 aa16.25■□□□□ 0.19
PRPF40A-204ENST00000450303 MDC1Q14676 2089 aaKnown RBP16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 A0A1B0GX78 115 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 STX16-NPEPL1H3BU86 382 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 STX16O14662 325 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 DSCR3O14972 297 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 BIRC5O15392 142 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 KLK8O60259 260 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 IPO13O94829 963 aaKnown RBP16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 FKBP9O95302 570 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 MED26O95402 600 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 ERGP11308 486 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 MTHFD2P13995 350 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 CCND1P24385 295 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 ETV4P43268 484 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 OR1D4P47884 311 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 PNLIPRP1P54315 467 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 MLLT10P55197 1068 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 NAA20P61599 178 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 GRM7Q14831 915 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 TCTE1Q5JU00 501 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 GKAP1Q5VSY0 366 aaPredicted RBP16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 METTL2BQ6P1Q9 378 aaKnown RBP16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 FBXO42Q6P3S6 717 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 AGTRAPQ6RW13 159 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 SHISA6Q6ZSJ9 500 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 MED25Q71SY5 747 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 MRGPREQ86SM8 312 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 NUDCD3Q8IVD9 361 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 TRIM42Q8IWZ5 723 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 TMEM151AQ8N4L1 468 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 PTGR2Q8N8N7 351 aaPredicted RBP16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 OR2Y1Q8NGV0 311 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 MGARPQ8TDB4 240 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 RHBDF1Q96CC6 855 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 ZNF285Q96NJ3 590 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 NUDT9Q9BW91 350 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 RABEP2Q9H5N1 569 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 MRPS30Q9NP92 439 aaKnown RBP16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 TAC3Q9UHF0 121 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 MAU2Q9Y6X3 613 aa16.24■□□□□ 0.19
PRPF40A-204ENST00000450303 HYKKA2RU49 373 aa16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 A8MT66 165 aa16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 G3V2L1 256 aa16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 DLX3O60479 287 aa16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 SRPX2O60687 465 aaPredicted RBP16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 TRIM13O60858 407 aa16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 H2AFYO75367 372 aaKnown RBP16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 SLC16A8O95907 504 aa16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 BPGMP07738 259 aa16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 UMODP07911 640 aa16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 SBK3P0C264 359 aa16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 SERPINB4P48594 390 aa16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 SEC24CP53992 1094 aa16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 RRADP55042 308 aa16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 MPP2Q14168 576 aa16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 SETDB1Q15047 1291 aa16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 NADK2Q4G0N4 442 aa16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 LIPMQ5VYY2 423 aa16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 COX15Q7KZN9 410 aa16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 OVCH1Q7RTY7 1134 aa16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 ANKS4BQ8N8V4 417 aa16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 TMEM102Q8N9M5 508 aaPredicted RBP16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 PPP1R14CQ8TAE6 165 aa16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 PPP4R1Q8TF05 950 aa16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 ZNF480Q8WV37 535 aa16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 PHF21BQ96EK2 531 aa16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 MLXIPLQ9NP71 852 aa16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 PTBP2Q9UKA9 531 aaKnown RBP16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 RRP15Q9Y3B9 282 aaKnown RBP16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 PCDHGA9Q9Y5G4 932 aaKnown RBP16.23■□□□□ 0.19
PRPF40A-204ENST00000450303 OR2A25A4D2G3 310 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 FITM1A5D6W6 292 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 PEX12O00623 359 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 STK16O75716 305 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 CEACAM4O75871 244 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 VIMP08670 466 aaKnown RBP16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 CD63P08962 238 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 DHRS4L1P0CG22 281 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 IMPDH1P20839 514 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 IMPA1P29218 277 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 ALDH3A1P30838 453 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 GGT5P36269 586 aa16.22■□□□□ 0.19
PRPF40A-204ENST00000450303 DNAJB13P59910 316 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms