RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 TBX20Q9UMR3 447 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TCAF1Q9Y4C2 921 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TIMM22Q9Y584 194 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 PPP2R3BQ9Y5P8 575 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 DMRT1Q9Y5R6 373 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SNX10Q9Y5X0 201 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ZNF804BA4D1E1 1349 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 A0A0G2JMP0 313 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 MGAT4DA6NG13 374 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 RNF225M0QZC1 329 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 ARVCFO00192 962 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 EPHB6O15197 1021 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SLC31A2O15432 143 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 FGF10O15520 208 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 TMEM63AO94886 807 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 KCNK2O95069 426 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CPB1P15086 417 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 JUNDP17535 347 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 S100A11P31949 105 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SHMT1P34896 483 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 HMGCLP35914 325 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CPOXP36551 454 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 GLP1RP43220 463 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 PITPNBP48739 271 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 EPHA4P54764 986 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 RAG2P55895 527 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TAS2R60P59551 318 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 FOXO4P98177 505 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 POU4F2Q12837 409 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ZNF155Q12901 538 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 SEMA5AQ13591 1074 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 MOGAT2Q3SYC2 334 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 RNASE10Q5GAN6 216 aaKnown RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 KRBOX4Q5JUW0 171 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 FAM26DQ5JW98 314 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 C10orf62Q5T681 223 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 ATPAF1Q5TC12 328 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 UTS2BQ765I0 119 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 P4HA3Q7Z4N8 544 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 MILR1Q7Z6M3 343 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 FAM83AQ86UY5 434 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 GID4Q8IVV7 300 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 DNAJC22Q8N4W6 341 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ZNF614Q8N883 585 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ZNF615Q8N8J6 731 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ZNF454Q8N9F8 522 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 OR4M2Q8NGB6 313 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SLC35B2Q8TB61 432 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 NANPQ8TBE9 248 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TAS1R2Q8TE23 839 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ZDHHC1Q8WTX9 485 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 RNF139Q8WU17 664 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CHTF18Q8WVB6 975 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 OR8D1Q8WZ84 308 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SMPDL3AQ92484 453 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 UBE2E3Q969T4 207 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 DCPSQ96C86 337 aaKnown RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 CMBLQ96DG6 245 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 PHYHIPLQ96FC7 376 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ELMOD3Q96FG2 381 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 OR52B2Q96RD2 323 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 WACQ9BTA9 647 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 C1QTNF7Q9BXJ2 289 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CHIAQ9BZP6 476 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 POLR3FQ9H1D9 316 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 PCED1AQ9H1Q7 454 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ATG5Q9H1Y0 275 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 LHX5Q9H2C1 402 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 OLAHQ9NV23 265 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SALL4Q9UJQ4 1053 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TMPRSS11EQ9UL52 423 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 NRXN3Q9Y4C0 1643 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 C1orf167Q5SNV9 1468 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CD163L1Q9NR16 1453 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 MYH3P11055 1940 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 LOC285095A0A1B0GVY8 99 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TMEM72A0PK05 275 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 LCHNA4D1U4 455 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ACOD1A6NK06 481 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 MPTX1A8MV57 137 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ZNF587BE7ETH6 402 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 NEDD8-MDP1E9PL57 170 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TERTO14746 1132 aaKnown RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 CASC3O15234 703 aaKnown RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 STK16O75716 305 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 OPN1LWP04000 364 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CYBBP04839 570 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 IFNW1P05000 195 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 RPLP1P05386 114 aaKnown RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 ARSBP15848 533 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SYN1P17600 705 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 PTPN1P18031 435 aaKnown RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 NFYAP23511 347 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 FMO4P31512 558 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 GRK4P32298 578 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 DLSTP36957 453 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CD96P40200 585 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CDKN2BP42772 138 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 RFX5P48382 616 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 FHITP49789 147 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms