RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 MT-ND2P03891 347 aa16.29■□□□□ 0.2
TOM1-210ENST00000449058 RPP38P78345 283 aaKnown RBP16.29■□□□□ 0.2
TOM1-210ENST00000449058 GRIN2CQ14957 1233 aa16.29■□□□□ 0.2
TOM1-210ENST00000449058 NR1D2Q14995 579 aa16.29■□□□□ 0.2
TOM1-210ENST00000449058 TEAD4Q15561 434 aa16.29■□□□□ 0.2
TOM1-210ENST00000449058 PROX2Q3B8N5 592 aa16.29■□□□□ 0.2
TOM1-210ENST00000449058 POM121L1PQ3SYA9 428 aa16.29■□□□□ 0.2
TOM1-210ENST00000449058 ARHGAP15Q53QZ3 475 aa16.29■□□□□ 0.2
TOM1-210ENST00000449058 FAM124AQ86V42 546 aa16.29■□□□□ 0.2
TOM1-210ENST00000449058 OR4A15Q8NGL6 344 aa16.29■□□□□ 0.2
TOM1-210ENST00000449058 REPS1Q96D71 796 aa16.29■□□□□ 0.2
TOM1-210ENST00000449058 ZNF347Q96SE7 839 aa16.29■□□□□ 0.2
TOM1-210ENST00000449058 RHNO1Q9BSD3 238 aa16.29■□□□□ 0.2
TOM1-210ENST00000449058 NECTIN3Q9NQS3 549 aa16.29■□□□□ 0.2
TOM1-210ENST00000449058 WNT6Q9Y6F9 365 aa16.29■□□□□ 0.2
TOM1-210ENST00000449058 H3BM21 787 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 RGS10O43665 173 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 RFPL2O75678 378 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 NPPBP16860 134 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 ZNF8P17098 575 aaPredicted RBP16.28■□□□□ 0.2
TOM1-210ENST00000449058 PTPN2P17706 415 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 PBLDP30039 288 aaPredicted RBP16.28■□□□□ 0.2
TOM1-210ENST00000449058 KRT20P35900 424 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 OPRL1P41146 370 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 TBPL1P62380 186 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 MVKQ03426 396 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 CAMK2GQ13555 558 aaPredicted RBP16.28■□□□□ 0.2
TOM1-210ENST00000449058 LINC00299Q6ZSB3 139 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 PARS2Q7L3T8 475 aaKnown RBP16.28■□□□□ 0.2
TOM1-210ENST00000449058 TMPRSS11BQ86T26 416 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 ZNF540Q8NDQ6 660 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 SH3YL1Q96HL8 342 aaPredicted RBP16.28■□□□□ 0.2
TOM1-210ENST00000449058 HRASLS5Q96KN8 279 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 REEP4Q9H6H4 257 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 GPATCH2Q9NW75 528 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 SH3BP4Q9P0V3 963 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 ERGIC3Q9Y282 383 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 ITM2BQ9Y287 266 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 PSMD11O00231 422 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 FOXE1O00358 373 aaPredicted RBP16.28■□□□□ 0.2
TOM1-210ENST00000449058 FAM20BO75063 409 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 NTRK1P04629 796 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 RHOP08100 348 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 RXRGP48443 463 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 ERVFC1P60507 584 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 SELENOWP63302 87 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 ZNF763Q0D2J5 394 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 CLCA4Q14CN2 919 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 ADPRMQ3LIE5 342 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 CATSPEREQ5SY80 951 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 C10orf62Q5T681 223 aaPredicted RBP16.28■□□□□ 0.2
TOM1-210ENST00000449058 ERAP2Q6P179 960 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 PRSS48Q7RTY5 328 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 IGFN1Q86VF2 1251 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 LAS2Q8IYD9 372 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 SVOPQ8N4V2 548 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 SNRNP27Q8WVK2 155 aaKnown RBP16.28■□□□□ 0.2
TOM1-210ENST00000449058 OTUB2Q96DC9 234 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 COQ10AQ96MF6 247 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 ACOT13Q9NPJ3 140 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 SH2B3Q9UQQ2 575 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 IRAK3Q9Y616 596 aa16.28■□□□□ 0.2
TOM1-210ENST00000449058 SOBPA7XYQ1 873 aa16.27■□□□□ 0.2
TOM1-210ENST00000449058 HIDE1A8MVS5 230 aa16.27■□□□□ 0.2
TOM1-210ENST00000449058 PCDHGA12O60330 932 aa16.27■□□□□ 0.2
TOM1-210ENST00000449058 LILRB5O75023 590 aa16.27■□□□□ 0.2
TOM1-210ENST00000449058 TNFRSF21O75509 655 aa16.27■□□□□ 0.2
TOM1-210ENST00000449058 SOD1P00441 154 aa16.27■□□□□ 0.2
TOM1-210ENST00000449058 ACRP10323 421 aa16.27■□□□□ 0.2
TOM1-210ENST00000449058 AQP1P29972 269 aa16.27■□□□□ 0.2
TOM1-210ENST00000449058 RRM2P31350 389 aa16.27■□□□□ 0.2
TOM1-210ENST00000449058 BCL7AQ4VC05 210 aa16.27■□□□□ 0.2
TOM1-210ENST00000449058 ARMCX6Q7L4S7 300 aa16.27■□□□□ 0.2
TOM1-210ENST00000449058 OTOP2Q7RTS6 562 aa16.27■□□□□ 0.2
TOM1-210ENST00000449058 CENPSQ8N2Z9 138 aa16.27■□□□□ 0.2
TOM1-210ENST00000449058 APH1BQ8WW43 257 aa16.27■□□□□ 0.2
TOM1-210ENST00000449058 IPCEF1Q8WWN9 437 aaPredicted RBP16.27■□□□□ 0.2
TOM1-210ENST00000449058 UBE2FQ969M7 185 aa16.27■□□□□ 0.2
TOM1-210ENST00000449058 VMP1Q96GC9 406 aa16.27■□□□□ 0.2
TOM1-210ENST00000449058 ZNF300Q96RE9 604 aaPredicted RBP16.27■□□□□ 0.2
TOM1-210ENST00000449058 TCF25Q9BQ70 676 aa16.27■□□□□ 0.2
TOM1-210ENST00000449058 SGPP1Q9BX95 441 aa16.27■□□□□ 0.2
TOM1-210ENST00000449058 LMCD1Q9NZU5 365 aa16.27■□□□□ 0.2
TOM1-210ENST00000449058 HCFC2Q9Y5Z7 792 aa16.27■□□□□ 0.2
TOM1-210ENST00000449058 HNRNPCP07910 306 aaKnown RBP eCLIP16.27■□□□□ 0.19
TOM1-210ENST00000449058 SRPRAP08240 638 aaKnown RBP16.27■□□□□ 0.19
TOM1-210ENST00000449058 IDUAP35475 653 aa16.27■□□□□ 0.19
TOM1-210ENST00000449058 PXNP49023 591 aaPredicted RBP16.27■□□□□ 0.19
TOM1-210ENST00000449058 HBA1P69905 142 aa16.27■□□□□ 0.19
TOM1-210ENST00000449058 PDE7AQ13946 482 aa16.27■□□□□ 0.19
TOM1-210ENST00000449058 COX20Q5RI15 118 aa16.27■□□□□ 0.19
TOM1-210ENST00000449058 ZNF852Q6ZMS4 543 aa16.27■□□□□ 0.19
TOM1-210ENST00000449058 COMMD6Q7Z4G1 85 aa16.27■□□□□ 0.19
TOM1-210ENST00000449058 P2RY8Q86VZ1 359 aa16.27■□□□□ 0.19
TOM1-210ENST00000449058 ENTHD1Q8IYW4 607 aa16.27■□□□□ 0.19
TOM1-210ENST00000449058 VN1R2Q8NFZ6 395 aa16.27■□□□□ 0.19
TOM1-210ENST00000449058 DTD2Q96FN9 168 aa16.27■□□□□ 0.19
TOM1-210ENST00000449058 EFCAB11Q9BUY7 163 aa16.27■□□□□ 0.19
TOM1-210ENST00000449058 CRISPLD2Q9H0B8 497 aa16.27■□□□□ 0.19
TOM1-210ENST00000449058 NDUFAF4Q9P032 175 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms