RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 PRTGQ2VWP7 1150 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 TMEM35AQ53FP2 167 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 SGO1Q5FBB7 561 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 CLEC6AQ6EIG7 209 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 NIPAL1Q6NVV3 410 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 RNF165Q6ZSG1 346 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 CHSY3Q70JA7 882 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 ABHD13Q7L211 337 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 ZNF781Q8N8C0 355 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 GBP7Q8N8V2 638 aaPredicted RBP12.56□□□□□ -0.4
TIMP1-204ENST00000445623 SRFBP1Q8NEF9 429 aaKnown RBP12.56□□□□□ -0.4
TIMP1-204ENST00000445623 AGR3Q8TD06 166 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 CREB3L4Q8TEY5 395 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 USP7Q93009 1102 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 NXPE2Q96DL1 559 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 C7orf26Q96N11 449 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 KCNA7Q96RP8 456 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 SORT1Q99523 831 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 MTERF1Q99551 399 aaKnown RBP12.56□□□□□ -0.4
TIMP1-204ENST00000445623 SERPINI1Q99574 410 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 CCT7Q99832 543 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 APMAPQ9HDC9 416 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 TXLNGQ9NUQ3 528 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 ZDHHC2Q9UIJ5 367 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 HAO1Q9UJM8 370 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 RUVBL1Q9Y265 456 aaKnown RBP12.56□□□□□ -0.4
TIMP1-204ENST00000445623 TIMM22Q9Y584 194 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 PCDHGA3Q9Y5H0 932 aa12.56□□□□□ -0.4
TIMP1-204ENST00000445623 HYKKA2RU49 373 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 MAGEB17A8MXT2 336 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 SLCO1B7G3V0H7 640 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 P2RX6O15547 441 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 CPNE3O75131 537 aaKnown RBP12.55□□□□□ -0.4
TIMP1-204ENST00000445623 TNFSF15O95150 251 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 PDYNP01213 254 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 PTX3P26022 381 aaPredicted RBP12.55□□□□□ -0.4
TIMP1-204ENST00000445623 ARRB2P32121 409 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 ETV5P41161 510 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 FOXA1P55317 472 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 RPS13P62277 151 aaKnown RBP12.55□□□□□ -0.4
TIMP1-204ENST00000445623 GUCY1A3Q02108 690 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 HERC3Q15034 1050 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 IMPG1Q17R60 797 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 HKDC1Q2TB90 917 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 TOR1AIP1Q5JTV8 583 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 TCHHL1Q5QJ38 904 aaPredicted RBP12.55□□□□□ -0.4
TIMP1-204ENST00000445623 CES4AQ5XG92 561 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 TRIM40Q6P9F5 258 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 IGF2-ASQ6U949 168 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 TWIST2Q8WVJ9 160 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 GAL3ST3Q96A11 431 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 MTFMTQ96DP5 389 aaKnown RBP12.55□□□□□ -0.4
TIMP1-204ENST00000445623 CTRCQ99895 268 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 MS4A8Q9BY19 250 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 SLC6A16Q9GZN6 736 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 C20orf27Q9GZN8 174 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 REXO4Q9GZR2 422 aaKnown RBP12.55□□□□□ -0.4
TIMP1-204ENST00000445623 SPRTNQ9H040 489 aaPredicted RBP12.55□□□□□ -0.4
TIMP1-204ENST00000445623 CCDC134Q9H6E4 229 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 ZNF395Q9H8N7 513 aaPredicted RBP12.55□□□□□ -0.4
TIMP1-204ENST00000445623 ACTR5Q9H9F9 607 aaPredicted RBP12.55□□□□□ -0.4
TIMP1-204ENST00000445623 CUTCQ9NTM9 273 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 AHSPQ9NZD4 102 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 PCDHB3Q9Y5E6 796 aa12.55□□□□□ -0.4
TIMP1-204ENST00000445623 SERTM1A2A2V5 107 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 LRIT2A6NDA9 550 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 H3BMH7 237 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 SLC28A1O00337 649 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 ZNF749O43361 778 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 RGS14O43566 566 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 SEMA3DO95025 777 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 TGFB1P01137 390 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 STATHP02808 62 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 CD82P27701 267 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 SERPINB3P29508 390 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 NEK2P51955 445 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 RAP1GDS1P52306 607 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 ARFIP1P53367 373 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 CUL3Q13618 768 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 FAM53BQ14153 422 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 KHDRBS2Q5VWX1 349 aaKnown RBP12.54□□□□□ -0.4
TIMP1-204ENST00000445623 ADNP2Q6IQ32 1131 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 RHBDD2Q6NTF9 364 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 PWWP2BQ6NUJ5 590 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 TMEM214Q6NUQ4 689 aaKnown RBP12.54□□□□□ -0.4
TIMP1-204ENST00000445623 VN1R5Q7Z5H4 357 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 WDR75Q8IWA0 830 aaKnown RBP12.54□□□□□ -0.4
TIMP1-204ENST00000445623 DDIASQ8IXT1 998 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 KCT2Q8NC54 265 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 OR2L5Q8NG80 312 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 ZCCHC10Q8TBK6 192 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 PIWIL2Q8TC59 973 aaKnown RBP12.54□□□□□ -0.4
TIMP1-204ENST00000445623 PROKR1Q8TCW9 393 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 CLIP3Q96DZ5 547 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 MVB12AQ96EY5 273 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 PRR11Q96HE9 360 aaPredicted RBP12.54□□□□□ -0.4
TIMP1-204ENST00000445623 KCNC2Q96PR1 638 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 ULBP3Q9BZM4 244 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 ROGDIQ9GZN7 287 aa12.54□□□□□ -0.4
TIMP1-204ENST00000445623 SYNPO2LQ9H987 977 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms