RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 OR4D2P58180 307 aa13.48□□□□□ -0.25
HMGN1-208ENST00000443046 FOXD4Q12950 439 aaPredicted RBP13.48□□□□□ -0.25
HMGN1-208ENST00000443046 SPA17Q15506 151 aa13.48□□□□□ -0.25
HMGN1-208ENST00000443046 ARHGAP11AQ6P4F7 1023 aa13.48□□□□□ -0.25
HMGN1-208ENST00000443046 REXO1L1PQ8IX06 675 aa13.48□□□□□ -0.25
HMGN1-208ENST00000443046 AFAP1L2Q8N4X5 818 aa13.48□□□□□ -0.25
HMGN1-208ENST00000443046 KCT2Q8NC54 265 aa13.48□□□□□ -0.25
HMGN1-208ENST00000443046 ASB11Q8WXH4 323 aa13.48□□□□□ -0.25
HMGN1-208ENST00000443046 ATG4AQ8WYN0 398 aa13.48□□□□□ -0.25
HMGN1-208ENST00000443046 FAM136AQ96C01 138 aa13.48□□□□□ -0.25
HMGN1-208ENST00000443046 SEC16BQ96JE7 1060 aa13.48□□□□□ -0.25
HMGN1-208ENST00000443046 TCF12Q99081 682 aa13.48□□□□□ -0.25
HMGN1-208ENST00000443046 ANKHQ9HCJ1 492 aa13.48□□□□□ -0.25
HMGN1-208ENST00000443046 ZNF358Q9NW07 568 aa13.48□□□□□ -0.25
HMGN1-208ENST00000443046 ST6GALNAC2Q9UJ37 374 aa13.48□□□□□ -0.25
HMGN1-208ENST00000443046 KLF13Q9Y2Y9 288 aaPredicted RBP13.48□□□□□ -0.25
HMGN1-208ENST00000443046 SLC22A7Q9Y694 548 aa13.48□□□□□ -0.25
HMGN1-208ENST00000443046 E7EVH7 732 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 KLRC4-KLRK1H3BQV0 150 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 LIASO43766 372 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 PEX1O43933 1283 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 HS6ST1O60243 411 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 CDC123O75794 336 aaPredicted RBP13.47□□□□□ -0.25
HMGN1-208ENST00000443046 APRTP07741 180 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 CHRM3P20309 590 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 IMPA1P29218 277 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 RFC3P40938 356 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 NR0B1P51843 470 aaKnown RBP13.47□□□□□ -0.25
HMGN1-208ENST00000443046 DLX5P56178 289 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 NUP107P57740 925 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 PPP2R2AP63151 447 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 CRADDP78560 199 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 PMPCAQ10713 525 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 RPS6KA1Q15418 735 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 RNF187Q5TA31 235 aaPredicted RBP13.47□□□□□ -0.25
HMGN1-208ENST00000443046 MRNIPQ6NTE8 343 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 CYHR1Q6ZMK1 362 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 PRUNE1Q86TP1 453 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 CAMKVQ8NCB2 501 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 NFAM1Q8NET5 270 aaPredicted RBP13.47□□□□□ -0.25
HMGN1-208ENST00000443046 OR52N2Q8NGI0 321 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 TMEM125Q96AQ2 219 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 PEX11GQ96HA9 241 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 PANX2Q96RD6 677 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 SLC30A3Q99726 388 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 KIFC1Q9BW19 673 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 FAM129AQ9BZQ8 928 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 IL22Q9GZX6 179 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 LACRTQ9GZZ8 138 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 LIME1Q9H400 295 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 RAB6BQ9NRW1 208 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 DNAJB12Q9NXW2 375 aaKnown RBP13.47□□□□□ -0.25
HMGN1-208ENST00000443046 REXO2Q9Y3B8 237 aaKnown RBP13.47□□□□□ -0.25
HMGN1-208ENST00000443046 NAALAD2Q9Y3Q0 740 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 L3MBTL1Q9Y468 752 aa13.47□□□□□ -0.25
HMGN1-208ENST00000443046 TMEM200CA6NKL6 621 aa13.46□□□□□ -0.25
HMGN1-208ENST00000443046 USP27XA6NNY8 438 aa13.46□□□□□ -0.25
HMGN1-208ENST00000443046 LCMT2O60294 686 aaKnown RBP13.46□□□□□ -0.25
HMGN1-208ENST00000443046 PRMT3O60678 531 aa13.46□□□□□ -0.25
HMGN1-208ENST00000443046 DNAJB6O75190 326 aa13.46□□□□□ -0.25
HMGN1-208ENST00000443046 ZWINTO95229 277 aa13.46□□□□□ -0.25
HMGN1-208ENST00000443046 PTMAP06454 111 aaKnown RBP13.46□□□□□ -0.25
HMGN1-208ENST00000443046 FHP07954 510 aa13.46□□□□□ -0.25
HMGN1-208ENST00000443046 DRD2P14416 443 aa13.46□□□□□ -0.25
HMGN1-208ENST00000443046 ETS1P14921 441 aa13.46□□□□□ -0.25
HMGN1-208ENST00000443046 MYBPHQ13203 477 aa13.46□□□□□ -0.25
HMGN1-208ENST00000443046 ACAD11Q709F0 780 aa13.46□□□□□ -0.25
HMGN1-208ENST00000443046 SDCCAG8Q86SQ7 713 aaPredicted RBP13.46□□□□□ -0.25
HMGN1-208ENST00000443046 SLC26A11Q86WA9 606 aa13.46□□□□□ -0.25
HMGN1-208ENST00000443046 CLYBLQ8N0X4 340 aa13.46□□□□□ -0.25
HMGN1-208ENST00000443046 OR5T3Q8NGG3 340 aa13.46□□□□□ -0.25
HMGN1-208ENST00000443046 ZCCHC10Q8TBK6 192 aa13.46□□□□□ -0.25
HMGN1-208ENST00000443046 MFSD3Q96ES6 412 aa13.46□□□□□ -0.25
HMGN1-208ENST00000443046 RBCK1Q9BYM8 510 aa13.46□□□□□ -0.25
HMGN1-208ENST00000443046 KLHL42Q9P2K6 505 aa13.46□□□□□ -0.25
HMGN1-208ENST00000443046 CRYL1Q9Y2S2 319 aa13.46□□□□□ -0.25
HMGN1-208ENST00000443046 MED16Q9Y2X0 877 aa13.46□□□□□ -0.25
HMGN1-208ENST00000443046 JMJD1CQ15652 2540 aa13.46□□□□□ -0.26
HMGN1-208ENST00000443046 MIF4GDA9UHW6 222 aaKnown RBP13.45□□□□□ -0.26
HMGN1-208ENST00000443046 CDC40O60508 579 aaKnown RBP eCLIP13.45□□□□□ -0.26
HMGN1-208ENST00000443046 VAPBO95292 243 aa13.45□□□□□ -0.26
HMGN1-208ENST00000443046 IFNB1P01574 187 aa13.45□□□□□ -0.26
HMGN1-208ENST00000443046 MPC1LP0DKB6 136 aa13.45□□□□□ -0.26
HMGN1-208ENST00000443046 CYLC1P35663 651 aaPredicted RBP13.45□□□□□ -0.26
HMGN1-208ENST00000443046 COILP38432 576 aaPredicted RBP13.45□□□□□ -0.26
HMGN1-208ENST00000443046 NPY2RP49146 381 aa13.45□□□□□ -0.26
HMGN1-208ENST00000443046 NAP1L1P55209 391 aaKnown RBP13.45□□□□□ -0.26
HMGN1-208ENST00000443046 SESN2P58004 480 aaPredicted RBP13.45□□□□□ -0.26
HMGN1-208ENST00000443046 MEF2AQ02078 507 aaPredicted RBP13.45□□□□□ -0.26
HMGN1-208ENST00000443046 THEMIS2Q5TEJ8 643 aa13.45□□□□□ -0.26
HMGN1-208ENST00000443046 KIAA0408Q6ZU52 694 aa13.45□□□□□ -0.26
HMGN1-208ENST00000443046 CENPUQ71F23 418 aa13.45□□□□□ -0.26
HMGN1-208ENST00000443046 MDGA2Q7Z553 956 aa13.45□□□□□ -0.26
HMGN1-208ENST00000443046 ASPGQ86U10 573 aa13.45□□□□□ -0.26
HMGN1-208ENST00000443046 UBL4BQ8N7F7 174 aa13.45□□□□□ -0.26
HMGN1-208ENST00000443046 GIMAP7Q8NHV1 300 aa13.45□□□□□ -0.26
HMGN1-208ENST00000443046 SLC13A3Q8WWT9 602 aa13.45□□□□□ -0.26
HMGN1-208ENST00000443046 TBC1D20Q96BZ9 403 aa13.45□□□□□ -0.26
HMGN1-208ENST00000443046 ALPK1Q96QP1 1244 aa13.45□□□□□ -0.26
HMGN1-208ENST00000443046 SARGQ9BW04 601 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms