RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 ADRA1DP25100 572 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 ADSLP30566 484 aaPredicted RBP9.36□□□□□ -0.91
SYN3-204ENST00000441821 PTPN7P35236 360 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 HSD17B2P37059 387 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 RFC3P40938 356 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 ZFP36L2P47974 494 aaKnown RBP9.36□□□□□ -0.91
SYN3-204ENST00000441821 MLF1P58340 268 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 PRAMEP78395 509 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 ABATP80404 500 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 MPP1Q00013 466 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 CDH17Q12864 832 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.36□□□□□ -0.91
SYN3-204ENST00000441821 TMEM198Q66K66 360 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 TMEM214Q6NUQ4 689 aaKnown RBP9.36□□□□□ -0.91
SYN3-204ENST00000441821 PAOXQ6QHF9 649 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 ADCK2Q7Z695 626 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 LDB1Q86U70 411 aaPredicted RBP9.36□□□□□ -0.91
SYN3-204ENST00000441821 LRRC6Q86X45 466 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 PRIMA1Q86XR5 153 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 CDC20BQ86Y33 519 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 ARMC10Q8N2F6 343 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 KIF2BQ8N4N8 673 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 FAM71DQ8N9W8 422 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 OR52N2Q8NGI0 321 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 OR52K1Q8NGK4 314 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 OR5M3Q8NGP4 307 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 GOT1L1Q8NHS2 421 aaPredicted RBP9.36□□□□□ -0.91
SYN3-204ENST00000441821 SPATA3Q8NHX4 192 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 PEX13Q92968 403 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 ZNF778Q96MU6 729 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 OR1F2PQ96R84 312 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 REPIN1Q9BWE0 567 aaKnown RBP9.36□□□□□ -0.91
SYN3-204ENST00000441821 ANAPC5Q9UJX4 755 aa9.36□□□□□ -0.91
SYN3-204ENST00000441821 KCNE1BA0A087WTH5 132 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 ZNF839A8K0R7 811 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 ERI2A8K979 691 aaKnown RBP9.35□□□□□ -0.91
SYN3-204ENST00000441821 ARHGEF33A8MVX0 844 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 KIAA1324LA8MWY0 1029 aaPredicted RBP9.35□□□□□ -0.91
SYN3-204ENST00000441821 FCHO1O14526 889 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 PDE9AO76083 593 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 TJP3O95049 919 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 HEXAP06865 529 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 INHBBP09529 407 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 IL1RNP18510 177 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 RPS3P23396 243 aaKnown RBP eCLIP9.35□□□□□ -0.91
SYN3-204ENST00000441821 ACVR2AP27037 513 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 ATP5DP30049 168 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 PEX19P40855 299 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 CETN2P41208 172 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 KIR2DL3P43628 341 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 PNLIPRP1P54315 467 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 OR4D2P58180 307 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 TSTA3Q13630 321 aaPredicted RBP9.35□□□□□ -0.91
SYN3-204ENST00000441821 GBX1Q14549 363 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 GXYLT1Q4G148 440 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 C11orf63Q6NUN7 778 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 PAMR1Q6UXH9 720 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 CLEC9AQ6UXN8 241 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 VN1R4Q7Z5H5 301 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 PLD3Q8IV08 490 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 REXO1L1PQ8IX06 675 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 WFDC11Q8NEX6 87 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 OR10Q1Q8NGQ4 319 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 TSLPQ969D9 159 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 PKP4Q99569 1192 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 NAPGQ99747 312 aaPredicted RBP9.35□□□□□ -0.91
SYN3-204ENST00000441821 TTYH2Q9BSA4 534 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 ANKHQ9HCJ1 492 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 FAM114A2Q9NRY5 505 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 LANCL2Q9NS86 450 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 CATSPERZQ9NTU4 200 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 MARCH4Q9P2E8 410 aaPredicted RBP9.35□□□□□ -0.91
SYN3-204ENST00000441821 JRKLQ9Y4A0 524 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 PCDHA3Q9Y5H8 950 aa9.35□□□□□ -0.91
SYN3-204ENST00000441821 A0A0G2JNJ9 132 aa9.34□□□□□ -0.91
SYN3-204ENST00000441821 FEZF1A0PJY2 475 aa9.34□□□□□ -0.91
SYN3-204ENST00000441821 OR14I1A6ND48 311 aa9.34□□□□□ -0.91
SYN3-204ENST00000441821 A6NNC1 897 aa9.34□□□□□ -0.91
SYN3-204ENST00000441821 FAM171A2A8MVW0 826 aa9.34□□□□□ -0.91
SYN3-204ENST00000441821 E7ENX8 843 aa9.34□□□□□ -0.91
SYN3-204ENST00000441821 NPIPA2E9PIF3 369 aa9.34□□□□□ -0.91
SYN3-204ENST00000441821 NPIPA3F8WFD2 350 aa9.34□□□□□ -0.91
SYN3-204ENST00000441821 H7BY64 318 aa9.34□□□□□ -0.91
SYN3-204ENST00000441821 CD3EAPO15446 510 aaKnown RBP9.34□□□□□ -0.91
SYN3-204ENST00000441821 PSIP1O75475 530 aaKnown RBP9.34□□□□□ -0.91
SYN3-204ENST00000441821 CDC123O75794 336 aaPredicted RBP9.34□□□□□ -0.91
SYN3-204ENST00000441821 SLC16A8O95907 504 aa9.34□□□□□ -0.91
SYN3-204ENST00000441821 STATHP02808 62 aa9.34□□□□□ -0.91
SYN3-204ENST00000441821 RAF1P04049 648 aa9.34□□□□□ -0.91
SYN3-204ENST00000441821 GLI4P10075 376 aa9.34□□□□□ -0.91
SYN3-204ENST00000441821 HRH2P25021 359 aa9.34□□□□□ -0.91
SYN3-204ENST00000441821 HOXC12P31275 282 aa9.34□□□□□ -0.91
SYN3-204ENST00000441821 CTNNA1P35221 906 aaKnown RBP9.34□□□□□ -0.91
SYN3-204ENST00000441821 NR0B1P51843 470 aaKnown RBP9.34□□□□□ -0.91
SYN3-204ENST00000441821 RPS15AP62244 130 aaKnown RBP9.34□□□□□ -0.91
SYN3-204ENST00000441821 TAP2Q03519 686 aa9.34□□□□□ -0.91
SYN3-204ENST00000441821 DEFB113Q30KQ7 82 aa9.34□□□□□ -0.91
SYN3-204ENST00000441821 SLC25A35Q3KQZ1 300 aa9.34□□□□□ -0.91
SYN3-204ENST00000441821 MEI1Q5TIA1 1274 aa9.34□□□□□ -0.91
SYN3-204ENST00000441821 B3GNT6Q6ZMB0 384 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms