RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 ABHD13Q7L211 337 aa18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 CEP97Q8IW35 865 aa18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 PEX11GQ96HA9 241 aa18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 MAGEB10Q96LZ2 347 aaPredicted RBP18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 LMF1Q96S06 567 aa18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 CPNE1Q99829 537 aa18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 TUBB6Q9BUF5 446 aa18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 ZNF700Q9H0M5 742 aa18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 CAB39LQ9H9S4 337 aa18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 PELI2Q9HAT8 420 aa18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 LRRC4CQ9HCJ2 640 aa18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 SMYD2Q9NRG4 433 aa18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 WWOXQ9NZC7 414 aa18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 SLC22A14Q9Y267 594 aa18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 SLC22A7Q9Y694 548 aa18.77■□□□□ 0.6
SHROOM1-204ENST00000440118 HIVEP3Q5T1R4 2406 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 USP9YO00507 2555 aaPredicted RBP18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 LOC102723996A0A087X1L8 192 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 BLACEA4D250 179 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 CLEC18AA5D8T8 446 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 CYSRT1A8MQ03 144 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 SEC24DO94855 1032 aaPredicted RBP18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 S100BP04271 92 aaPredicted RBP18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 CELA2AP08217 269 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 CYC1P08574 325 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 STMN1P16949 149 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 GP5P40197 560 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 SNRPNP63162 240 aaKnown RBP18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 CDKL1Q00532 357 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 REEP5Q00765 189 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 SLMAPQ14BN4 828 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 PCOLCEQ15113 449 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 ZXDCQ2QGD7 858 aaPredicted RBP18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 DEFB134Q4QY38 66 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 B3GNTL1Q67FW5 361 aaPredicted RBP18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 TMEM205Q6UW68 189 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 IGFL2Q6UWQ7 119 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 CLEC18BQ6UXF7 455 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 C3orf62Q6ZUJ4 267 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 LANCL3Q6ZV70 420 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 PDSS2Q86YH6 399 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 CLEC18CQ8NCF0 446 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 ZNF740Q8NDX6 193 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 OR4K1Q8NGD4 311 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 ANKRD49Q8WVL7 239 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 RBBP8Q99708 897 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 GRHL1Q9NZI5 618 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 TEKT2Q9UIF3 430 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 ZFP69BQ9UJL9 534 aa18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 MTO1Q9Y2Z2 717 aaKnown RBP18.76■□□□□ 0.59
SHROOM1-204ENST00000440118 IGHV3-20A0A0C4DH32 117 aa18.75■□□□□ 0.59
SHROOM1-204ENST00000440118 A0A1W2PQ72 361 aa18.75■□□□□ 0.59
SHROOM1-204ENST00000440118 URADA6NGE7 173 aa18.75■□□□□ 0.59
SHROOM1-204ENST00000440118 PHGDHO43175 533 aaKnown RBP18.75■□□□□ 0.59
SHROOM1-204ENST00000440118 GSTA2P09210 222 aa18.75■□□□□ 0.59
SHROOM1-204ENST00000440118 ZNF888P0CJ79 500 aaPredicted RBP18.75■□□□□ 0.59
SHROOM1-204ENST00000440118 ALOX12P18054 663 aa18.75■□□□□ 0.59
SHROOM1-204ENST00000440118 STX2P32856 288 aa18.75■□□□□ 0.59
SHROOM1-204ENST00000440118 AHRP35869 848 aa18.75■□□□□ 0.59
SHROOM1-204ENST00000440118 HNF4AP41235 474 aa18.75■□□□□ 0.59
SHROOM1-204ENST00000440118 TSFMP43897 325 aaKnown RBP18.75■□□□□ 0.59
SHROOM1-204ENST00000440118 AGTR2P50052 363 aa18.75■□□□□ 0.59
SHROOM1-204ENST00000440118 EIF2S3LQ2VIR3 472 aaKnown RBP18.75■□□□□ 0.59
SHROOM1-204ENST00000440118 BTBD16Q32M84 506 aa18.75■□□□□ 0.59
SHROOM1-204ENST00000440118 C8orf74Q6P047 294 aa18.75■□□□□ 0.59
SHROOM1-204ENST00000440118 NXPE4Q6UWF7 544 aa18.75■□□□□ 0.59
SHROOM1-204ENST00000440118 FAM180AQ6UWF9 173 aa18.75■□□□□ 0.59
SHROOM1-204ENST00000440118 CPEB2Q7Z5Q1 589 aaKnown RBP18.75■□□□□ 0.59
SHROOM1-204ENST00000440118 PPM1NQ8N819 430 aa18.75■□□□□ 0.59
SHROOM1-204ENST00000440118 MOCOSQ96EN8 888 aa18.75■□□□□ 0.59
SHROOM1-204ENST00000440118 DERL2Q9GZP9 239 aa18.75■□□□□ 0.59
SHROOM1-204ENST00000440118 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.75■□□□□ 0.59
SHROOM1-204ENST00000440118 SPNS1Q9H2V7 528 aa18.75■□□□□ 0.59
SHROOM1-204ENST00000440118 CNOT10Q9H9A5 744 aaKnown RBP18.75■□□□□ 0.59
SHROOM1-204ENST00000440118 ANKUB1A6NFN9 424 aa18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 CXorf49A8MYA2 514 aaPredicted RBP18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 H2AFYO75367 372 aaKnown RBP18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 CCDC166P0CW27 439 aa18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 GNAZP19086 355 aa18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 IL10P22301 178 aa18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 JAK1P23458 1154 aa18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 SCTRP47872 440 aa18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 OLR1P78380 273 aa18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 ZNF33BQ06732 778 aa18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 SRSF1Q07955 248 aaKnown RBP eCLIP18.74■□□□□ 0.591e-6■■■□□ 18.3
SHROOM1-204ENST00000440118 ACTN3Q08043 901 aaPredicted RBP18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 ABRAXAS2Q15018 415 aa18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 ABHD17BQ5VST6 288 aa18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 RAPH1Q70E73 1250 aa18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 TCAIMQ8N3R3 496 aa18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 SPATA6LQ8N4H0 392 aa18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 TRPV3Q8NET8 790 aa18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 OR5T3Q8NGG3 340 aa18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 OR1N1Q8NGS0 311 aa18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 SUN3Q8TAQ9 357 aa18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 NT5CQ8TCD5 201 aa18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 FBXO25Q8TCJ0 367 aa18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 CCT6BQ92526 530 aa18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 EXT2Q93063 718 aa18.74■□□□□ 0.59
SHROOM1-204ENST00000440118 OR1F2PQ96R84 312 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms