RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 SOX8P57073 446 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 PPP2R2AP63151 447 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 TSTA3Q13630 321 aaPredicted RBP8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 MPP2Q14168 576 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 FAM214AQ32MH5 1076 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 CCSMST1Q4G0I0 132 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 AGAP7PQ5VUJ5 663 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 YOD1Q5VVQ6 348 aaPredicted RBP8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 Q6ZS92 163 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 MAMDC2Q7Z304 686 aaPredicted RBP8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 TBC1D1Q86TI0 1168 aaPredicted RBP8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 CUZD1Q86UP6 607 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 PLD6Q8N2A8 252 aaKnown RBP8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 ANKRD42Q8N9B4 389 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 GIMAP7Q8NHV1 300 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 DNAJB14Q8TBM8 379 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 CD200R1Q8TD46 325 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 EEF1AKMT1Q8WVE0 214 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 KCTD4Q8WVF5 259 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 ANKRD49Q8WVL7 239 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 INPP5DQ92835 1189 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 ZUFSPQ96AP4 578 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 NXNL1Q96CM4 212 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 APOPT1Q96IL0 206 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 VPS50Q96JG6 964 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 CNDP1Q96KN2 507 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 C5orf34Q96MH7 638 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 TSNARE1Q96NA8 513 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 AGAP4Q96P64 663 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 WDR77Q9BQA1 342 aaPredicted RBP8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 MENTQ9BUN1 341 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 YIPF2Q9BWQ6 316 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 RAB11FIP5Q9BXF6 653 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 UNKQ9C0B0 810 aaKnown RBP8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 IQCGQ9H095 443 aaKnown RBP8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 C12orf65Q9H3J6 166 aaKnown RBP8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 WDR54Q9H977 334 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 POPDC3Q9HBV1 291 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 SSU72Q9NP77 194 aaKnown RBP8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 AGPAT4Q9NRZ5 378 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 ZNF358Q9NW07 568 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 STOX2Q9P2F5 926 aaPredicted RBP8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 CTSFQ9UBX1 484 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 ERRFI1Q9UJM3 462 aaPredicted RBP8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 NXT1Q9UKK6 140 aaKnown RBP8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 RUVBL2Q9Y230 463 aaKnown RBP8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 SLC5A6Q9Y289 635 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 LRBAP50851 2863 aa8.77□□□□□ -1.01
AC011228.1-201ENST00000439027 TMEM120BA0PK00 339 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 HYKKA2RU49 373 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 KRT87PA6NCN2 255 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 TARM1B6A8C7 271 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 SOCS6O14544 535 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 POLR3GO15318 223 aaPredicted RBP8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 PRPF4O43172 522 aaKnown RBP eCLIP8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 TYROBPO43914 113 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 SRPX2O60687 465 aaPredicted RBP8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 CTSVO60911 334 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 FKBP9O95302 570 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 WISP3O95389 354 aaPredicted RBP8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 C1orf105O95561 183 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 GSTA1P08263 222 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 LTA4HP09960 611 aaKnown RBP8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 COL6A2P12110 1019 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 ZNF37AP17032 561 aaPredicted RBP8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 PSMB5P28074 263 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 RPA3P35244 121 aaPredicted RBP8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 IL2P60568 153 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 OCA2Q04671 838 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 DLG1Q12959 904 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 CSHL1Q14406 222 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 FAM83EQ2M2I3 478 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 TTLL9Q3SXZ7 439 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 TUBB8Q3ZCM7 444 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 ACSBG2Q5FVE4 666 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 KIRREL2Q6UWL6 708 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 LINC00696Q6ZRV3 163 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 COX15Q7KZN9 410 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 CCDC91Q7Z6B0 441 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 CPNE9Q8IYJ1 553 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 CENPLQ8N0S6 344 aaPredicted RBP8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 DTWD1Q8N5C7 304 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 NKAPQ8N5F7 415 aaKnown RBP8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 FAM76AQ8TAV0 307 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 TCP10LQ8TDR4 215 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 NACC2Q96BF6 587 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 LINGO1Q96FE5 620 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 THOC3Q96J01 351 aaKnown RBP8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 SCYL1Q96KG9 808 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 CRB3Q9BUF7 120 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 ACAT2Q9BWD1 397 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 LHPPQ9H008 270 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 SLC26A1Q9H2B4 701 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 ZNF304Q9HCX3 659 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 SEMA3GQ9NS98 782 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 IGSF5Q9NSI5 407 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 NKIRAS1Q9NYS0 192 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 SLC17A7Q9P2U7 560 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 DCDC2Q9UHG0 476 aa8.76□□□□□ -1.01
AC011228.1-201ENST00000439027 GRID1Q9ULK0 1009 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms