RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 TEX264Q9Y6I9 313 aa13.29□□□□□ -0.28
LINC01088-201ENST00000437737 PRRC2AP48634 2157 aaKnown RBP13.29□□□□□ -0.28
LINC01088-201ENST00000437737 A0A0A6YYC8 382 aaPredicted RBP13.28□□□□□ -0.28
LINC01088-201ENST00000437737 CCDC162PA2VCL2 907 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 OR2A25A4D2G3 310 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 NKX2-6A6NCS4 301 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 IQCF5A8MTL0 148 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 I3L1I5 382 aaPredicted RBP13.28□□□□□ -0.28
LINC01088-201ENST00000437737 ADAM10O14672 748 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 AVILO75366 819 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 GPC4O75487 556 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 ZWINTO95229 277 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 ZNF24P17028 368 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 ADRA1DP25100 572 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 CMPK1P30085 196 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 ELK3P41970 407 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 GRIA1P42261 906 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 EIF3BP55884 814 aaKnown RBP13.28□□□□□ -0.28
LINC01088-201ENST00000437737 SESN2P58004 480 aaPredicted RBP13.28□□□□□ -0.28
LINC01088-201ENST00000437737 MAT1AQ00266 395 aaKnown RBP13.28□□□□□ -0.28
LINC01088-201ENST00000437737 HKDC1Q2TB90 917 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 PLAG1Q6DJT9 500 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 FBXO42Q6P3S6 717 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 CASC4Q6P4E1 433 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 CYS1Q717R9 158 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 ZNF534Q76KX8 674 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 CPEB2Q7Z5Q1 589 aaKnown RBP13.28□□□□□ -0.28
LINC01088-201ENST00000437737 CROCCP2Q86T23 111 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 HORMAD2Q8N7B1 307 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 FBXO36Q8NEA4 188 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 PPHLN1Q8NEY8 458 aaKnown RBP13.28□□□□□ -0.28
LINC01088-201ENST00000437737 OR2A1Q8NGT9 310 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 ASB5Q8WWX0 329 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 SIGLEC10Q96LC7 697 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 FOXC2Q99958 501 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 DPH7Q9BTV6 452 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 ACAT2Q9BWD1 397 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 CDC42EP4Q9H3Q1 356 aaKnown RBP13.28□□□□□ -0.28
LINC01088-201ENST00000437737 GSX1Q9H4S2 264 aaPredicted RBP13.28□□□□□ -0.28
LINC01088-201ENST00000437737 VIPAS39Q9H9C1 493 aa13.28□□□□□ -0.28
LINC01088-201ENST00000437737 NPDC1Q9NQX5 325 aaPredicted RBP13.28□□□□□ -0.28
LINC01088-201ENST00000437737 C19orf25Q9UFG5 118 aaPredicted RBP13.28□□□□□ -0.28
LINC01088-201ENST00000437737 KRT87PA6NCN2 255 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 TMEM200CA6NKL6 621 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 GABRR3A8MPY1 467 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 RIPK2O43353 540 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 TPOP07202 933 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 SP1P08047 785 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 ABHD2P08910 425 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 PGAM1P18669 254 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 PAMP19021 973 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 MGAT1P26572 445 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 HSD17B3P37058 310 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 EFNA3P52797 238 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 YBX1P67809 324 aaKnown RBP13.27□□□□□ -0.29
LINC01088-201ENST00000437737 FOLH1Q04609 750 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 MYBPHQ13203 477 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 CASP8Q14790 479 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 MAPKAPK3Q16644 382 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 MINDY4Q4G0A6 757 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 CCSMST1Q4G0I0 132 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 MSS51Q4VC12 460 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 GARNL3Q5VVW2 1013 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 SLC25A25Q6KCM7 469 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 C3orf62Q6ZUJ4 267 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 LANCL3Q6ZV70 420 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 KRT222Q8N1A0 295 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 GABPB2Q8TAK5 448 aaPredicted RBP13.27□□□□□ -0.29
LINC01088-201ENST00000437737 PEX13Q92968 403 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 RERGQ96A58 199 aaPredicted RBP13.27□□□□□ -0.29
LINC01088-201ENST00000437737 PWWP2AQ96N64 755 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 VN1R1Q9GZP7 353 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 DRC3Q9H069 523 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 CXXC4Q9H2H0 198 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 PPCSQ9HAB8 311 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 CCM2LQ9NUG4 571 aaPredicted RBP13.27□□□□□ -0.29
LINC01088-201ENST00000437737 KCNN3Q9UGI6 736 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 ASB1Q9Y576 335 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 HEATR5BQ9P2D3 2071 aa13.27□□□□□ -0.29
LINC01088-201ENST00000437737 ZNF469Q96JG9 3925 aaPredicted RBP13.26□□□□□ -0.29
LINC01088-201ENST00000437737 A0A087WUV0 522 aaPredicted RBP13.26□□□□□ -0.29
LINC01088-201ENST00000437737 FAM237BA0A1B0GVD1 139 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 A0A1W2PPV9 198 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 MROH6A6NGR9 719 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 FOXS1O43638 330 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 C1orf105O95561 183 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 GOT2P00505 430 aaKnown RBP13.26□□□□□ -0.29
LINC01088-201ENST00000437737 STX2P32856 288 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 AVPR1BP47901 424 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 FRG1Q14331 258 aaKnown RBP13.26□□□□□ -0.29
LINC01088-201ENST00000437737 SPANXN3Q5MJ09 141 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 TMEM211Q6ICI0 200 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 H3F3CQ6NXT2 135 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 AFTPHQ6ULP2 937 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 CD163Q86VB7 1156 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 ANKMY2Q8IV38 441 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 CHERPQ8IWX8 916 aaKnown RBP13.26□□□□□ -0.29
LINC01088-201ENST00000437737 DMRTC2Q8IXT2 367 aaPredicted RBP13.26□□□□□ -0.29
LINC01088-201ENST00000437737 HMGCLL1Q8TB92 370 aa13.26□□□□□ -0.29
LINC01088-201ENST00000437737 NINJ1Q92982 152 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms