RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 CPZQ66K79 652 aa24.66■■□□□ 1.54
CPNE1-216ENST00000437340 ANKRD26P1Q6NSI1 321 aa24.66■■□□□ 1.54
CPNE1-216ENST00000437340 ENPP6Q6UWR7 440 aa24.66■■□□□ 1.54
CPNE1-216ENST00000437340 C2orf73Q8N5S3 287 aaPredicted RBP24.66■■□□□ 1.54
CPNE1-216ENST00000437340 VPS50Q96JG6 964 aa24.66■■□□□ 1.54
CPNE1-216ENST00000437340 FERD3LQ96RJ6 166 aa24.66■■□□□ 1.54
CPNE1-216ENST00000437340 ACAT2Q9BWD1 397 aa24.66■■□□□ 1.54
CPNE1-216ENST00000437340 RAB11FIP5Q9BXF6 653 aa24.66■■□□□ 1.54
CPNE1-216ENST00000437340 OSGEPL1Q9H4B0 414 aa24.66■■□□□ 1.54
CPNE1-216ENST00000437340 EXO1Q9UQ84 846 aaKnown RBP24.66■■□□□ 1.54
CPNE1-216ENST00000437340 ERVK-11Q9UQG0 969 aa24.66■■□□□ 1.54
CPNE1-216ENST00000437340 A0A1W2PPV9 198 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 MYBPC1Q00872 1141 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 SLC14A1Q13336 389 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 GK3PQ14409 553 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 IKBIPQ70UQ0 350 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 ZNF551Q7Z340 670 aaPredicted RBP24.65■■□□□ 1.54
CPNE1-216ENST00000437340 OR4K1Q8NGD4 311 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 NETO1Q8TDF5 533 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 C16orf78Q8WTQ4 265 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 DNASE1L2Q92874 299 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 CARS2Q9HA77 564 aaKnown RBP24.65■■□□□ 1.54
CPNE1-216ENST00000437340 AASDHPPTQ9NRN7 309 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 ZNF282Q9UDV7 671 aaPredicted RBP24.65■■□□□ 1.54
CPNE1-216ENST00000437340 SUFUQ9UMX1 484 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 EI24O14681 340 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 PRKD3O94806 890 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 MT-ND1P03886 318 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 REEP5Q00765 189 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 RBBP5Q15291 538 aaKnown RBP24.65■■□□□ 1.54
CPNE1-216ENST00000437340 MLF2Q15773 248 aaPredicted RBP24.65■■□□□ 1.54
CPNE1-216ENST00000437340 FAM71E1Q6IPT2 247 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 FAM86B1Q8N7N1 296 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 GOT1L1Q8NHS2 421 aaPredicted RBP24.65■■□□□ 1.54
CPNE1-216ENST00000437340 WDR48Q8TAF3 677 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 CAMK1GQ96NX5 476 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 TPT1P8Q9HAU6 139 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 NTN4Q9HB63 628 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 SH3BP4Q9P0V3 963 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 DNAJB9Q9UBS3 223 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 PCDHGB4Q9UN71 923 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 KCNK6Q9Y257 313 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 PCDHGB5Q9Y5G0 923 aa24.65■■□□□ 1.54
CPNE1-216ENST00000437340 C1orf226A1L170 272 aa24.64■■□□□ 1.53
CPNE1-216ENST00000437340 ANKDD1BA6NHY2 528 aa24.64■■□□□ 1.53
CPNE1-216ENST00000437340 UPK1AO00322 258 aa24.64■■□□□ 1.53
CPNE1-216ENST00000437340 IL9P15248 144 aa24.64■■□□□ 1.53
CPNE1-216ENST00000437340 ZNF23P17027 643 aa24.64■■□□□ 1.53
CPNE1-216ENST00000437340 MAT2AP31153 395 aaKnown RBP24.64■■□□□ 1.53
CPNE1-216ENST00000437340 RAB28P51157 221 aa24.64■■□□□ 1.53
CPNE1-216ENST00000437340 TFF2Q03403 129 aa24.64■■□□□ 1.53
CPNE1-216ENST00000437340 MERTKQ12866 999 aa24.64■■□□□ 1.53
CPNE1-216ENST00000437340 VMACQ2NL98 169 aa24.64■■□□□ 1.53
CPNE1-216ENST00000437340 DUS1LQ6P1R4 473 aaKnown RBP24.64■■□□□ 1.53
CPNE1-216ENST00000437340 SLC9B2Q86UD5 537 aa24.64■■□□□ 1.53
CPNE1-216ENST00000437340 DENND6BQ8NEG7 585 aa24.64■■□□□ 1.53
CPNE1-216ENST00000437340 ADI1Q9BV57 179 aa24.64■■□□□ 1.53
CPNE1-216ENST00000437340 MVB12BQ9H7P6 319 aa24.64■■□□□ 1.53
CPNE1-216ENST00000437340 VPS4AQ9UN37 437 aa24.64■■□□□ 1.53
CPNE1-216ENST00000437340 SAMD4AQ9UPU9 718 aaKnown RBP24.64■■□□□ 1.53
CPNE1-216ENST00000437340 WBP11Q9Y2W2 641 aaKnown RBP24.64■■□□□ 1.53
CPNE1-216ENST00000437340 DOCK9Q9BZ29 2069 aa24.63■■□□□ 1.53
CPNE1-216ENST00000437340 KCNK5O95279 499 aa24.63■■□□□ 1.53
CPNE1-216ENST00000437340 SERPINA1P01009 418 aa24.63■■□□□ 1.53
CPNE1-216ENST00000437340 ABCB1P08183 1280 aaPredicted RBP24.63■■□□□ 1.53
CPNE1-216ENST00000437340 FURINP09958 794 aa24.63■■□□□ 1.53
CPNE1-216ENST00000437340 KIAA1024LP59773 190 aa24.63■■□□□ 1.53
CPNE1-216ENST00000437340 NKG7Q16617 165 aa24.63■■□□□ 1.53
CPNE1-216ENST00000437340 UAP1L1Q3KQV9 507 aa24.63■■□□□ 1.53
CPNE1-216ENST00000437340 ZZZ3Q8IYH5 903 aa24.63■■□□□ 1.53
CPNE1-216ENST00000437340 LINC01555Q8NAE3 123 aa24.63■■□□□ 1.53
CPNE1-216ENST00000437340 TRAPPC9Q96Q05 1148 aa24.63■■□□□ 1.53
CPNE1-216ENST00000437340 CD320Q9NPF0 282 aa24.63■■□□□ 1.53
CPNE1-216ENST00000437340 PNPLA3Q9NST1 481 aa24.63■■□□□ 1.53
CPNE1-216ENST00000437340 SMPD3Q9NY59 655 aaPredicted RBP24.63■■□□□ 1.53
CPNE1-216ENST00000437340 PADI4Q9UM07 663 aa24.63■■□□□ 1.53
CPNE1-216ENST00000437340 SAP18O00422 153 aaKnown RBP24.62■■□□□ 1.53
CPNE1-216ENST00000437340 SLC31A1O15431 190 aa24.62■■□□□ 1.53
CPNE1-216ENST00000437340 KLK1P06870 262 aa24.62■■□□□ 1.53
CPNE1-216ENST00000437340 ACADMP11310 421 aa24.62■■□□□ 1.53
CPNE1-216ENST00000437340 RPS9P46781 194 aaKnown RBP24.62■■□□□ 1.53
CPNE1-216ENST00000437340 PPP2CBP62714 309 aa24.62■■□□□ 1.53
CPNE1-216ENST00000437340 PPP2CAP67775 309 aa24.62■■□□□ 1.53
CPNE1-216ENST00000437340 DEPDC1Q5TB30 811 aa24.62■■□□□ 1.53
CPNE1-216ENST00000437340 KRT80Q6KB66 452 aa24.62■■□□□ 1.53
CPNE1-216ENST00000437340 ZCCHC8Q6NZY4 707 aaKnown RBP24.62■■□□□ 1.53
CPNE1-216ENST00000437340 PYURFQ96I23 114 aa24.62■■□□□ 1.53
CPNE1-216ENST00000437340 FZD3Q9NPG1 666 aa24.62■■□□□ 1.53
CPNE1-216ENST00000437340 IMP3Q9NV31 184 aaKnown RBP24.62■■□□□ 1.53
CPNE1-216ENST00000437340 CUEDC1Q9NWM3 386 aaPredicted RBP24.62■■□□□ 1.53
CPNE1-216ENST00000437340 GPSM3Q9Y4H4 160 aa24.62■■□□□ 1.53
CPNE1-216ENST00000437340 KLHL18O94889 574 aa24.62■■□□□ 1.53
CPNE1-216ENST00000437340 SMIM18P0DKX4 95 aa24.62■■□□□ 1.53
CPNE1-216ENST00000437340 PKLRP30613 574 aa24.62■■□□□ 1.53
CPNE1-216ENST00000437340 C2orf80Q0P641 193 aa24.62■■□□□ 1.53
CPNE1-216ENST00000437340 VEZF1Q14119 521 aa24.62■■□□□ 1.53
CPNE1-216ENST00000437340 SLC36A3Q495N2 470 aa24.62■■□□□ 1.53
CPNE1-216ENST00000437340 KHDRBS2Q5VWX1 349 aaKnown RBP24.62■■□□□ 1.53
CPNE1-216ENST00000437340 OR2L8Q8NGY9 312 aa24.62■■□□□ 1.53
CPNE1-216ENST00000437340 ZFP90Q8TF47 636 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms