RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 MYO10Q9HD67 2058 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 LINC01387J3KSC0 135 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 GTPBP1O00178 669 aaKnown RBP7.21□□□□□ -1.26
CPSF6-202ENST00000435070 SOCS7O14512 581 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 SLC7A4O43246 635 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 NDUFS3O75489 264 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 S100A3P33764 101 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 FEN1P39748 380 aaKnown RBP7.21□□□□□ -1.26
CPSF6-202ENST00000435070 CLCN4P51793 760 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 SLC14A2Q15849 920 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 USF2Q15853 346 aaPredicted RBP7.21□□□□□ -1.26
CPSF6-202ENST00000435070 KLHL12Q53G59 568 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 ZNF551Q7Z340 670 aaPredicted RBP7.21□□□□□ -1.26
CPSF6-202ENST00000435070 GDPD1Q8N9F7 314 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 EEF1AKMT1Q8WVE0 214 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 RFT1Q96AA3 541 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 MIXL1Q9H2W2 232 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 CLEC4MQ9H2X3 399 aaPredicted RBP7.21□□□□□ -1.26
CPSF6-202ENST00000435070 C3orf14Q9HBI5 128 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 PAK6Q9NQU5 681 aaPredicted RBP7.21□□□□□ -1.26
CPSF6-202ENST00000435070 TAS2R13Q9NYV9 303 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 SAMD4AQ9UPU9 718 aaKnown RBP7.21□□□□□ -1.26
CPSF6-202ENST00000435070 PIN4Q9Y237 131 aaKnown RBP7.21□□□□□ -1.26
CPSF6-202ENST00000435070 A0A075B6Q4 140 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 MOXD2PA6NHM9 499 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 HOXD4P09016 255 aaPredicted RBP7.21□□□□□ -1.26
CPSF6-202ENST00000435070 HLA-DMAP28067 261 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 HSPA7P48741 367 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 CPT1AP50416 773 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 ERVFC1P60507 584 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 SLC10A7Q0GE19 358 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 EXOSC2Q13868 293 aaKnown RBP7.21□□□□□ -1.26
CPSF6-202ENST00000435070 FBXO47Q5MNV8 452 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 BCL2L15Q5TBC7 163 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 SHEQ5VZ18 495 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 ERICH5Q6P6B1 374 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 XKRXQ6PP77 449 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 ATCAYQ86WG3 371 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 ARHGAP12Q8IWW6 846 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 LINGO1Q96FE5 620 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 HRASLS5Q96KN8 279 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 POLR2J2Q9GZM3 115 aaKnown RBP7.21□□□□□ -1.26
CPSF6-202ENST00000435070 GPRC5BQ9NZH0 403 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 GJD2Q9UKL4 321 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 ING4Q9UNL4 249 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 ERVW-1Q9UQF0 538 aa7.21□□□□□ -1.26
CPSF6-202ENST00000435070 POM121CA8CG34 1229 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 J3KR12 359 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 LGALS8O00214 317 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 MATN3O15232 486 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 PPM1BO75688 479 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 CFDP00746 253 aaPredicted RBP7.2□□□□□ -1.26
CPSF6-202ENST00000435070 CCNCP24863 283 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 PTPN5P54829 565 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 USP39Q53GS9 565 aaKnown RBP7.2□□□□□ -1.26
CPSF6-202ENST00000435070 SMYD5Q6GMV2 418 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 SUSD1Q6UWL2 747 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 BCDIN3DQ7Z5W3 292 aaKnown RBP7.2□□□□□ -1.26
CPSF6-202ENST00000435070 ZZZ3Q8IYH5 903 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 LSM14AQ8ND56 463 aaKnown RBP7.2□□□□□ -1.26
CPSF6-202ENST00000435070 OR9Q2Q8NGE9 314 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 B3GALT6Q96L58 329 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 LINC00052Q96N35 136 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 NIPSNAP1Q9BPW8 284 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 DUSP16Q9BY84 665 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 HDHD2Q9H0R4 259 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 MED28Q9H204 178 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 PPA2Q9H2U2 334 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 WDR81Q562E7 1941 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 LINC00862A6NCI5 91 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 SYN3O14994 580 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 SIGLEC5O15389 551 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 INSRRP14616 1297 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 GGT2P36268 569 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 SIGLEC14Q08ET2 396 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 C6orf132Q5T0Z8 1188 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 KLHL24Q6TFL4 600 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 OR11H4Q8NGC9 324 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 APOL5Q9BWW9 433 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 SPNS1Q9H2V7 528 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 MAGIXQ9H6Y5 334 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 IPPKQ9H8X2 491 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 HEBP1Q9NRV9 189 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 ZNF226Q9NYT6 803 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 DIMT1Q9UNQ2 313 aaKnown RBP7.2□□□□□ -1.26
CPSF6-202ENST00000435070 UTRNP46939 3433 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 LOC105369274A0A096LPK9 316 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 ORC5O43913 435 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 SH3BGRLO75368 114 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 SDC2P34741 201 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 ETV1P50549 477 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 CDH12P55289 794 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 IHHQ14623 411 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 RNASE12Q5GAN4 147 aaKnown RBP7.2□□□□□ -1.26
CPSF6-202ENST00000435070 CLEC20AQ6ZU45 233 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 TAC4Q86UU9 113 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 OR4N4Q8N0Y3 316 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 LRRC17Q8N6Y2 441 aa7.2□□□□□ -1.26
CPSF6-202ENST00000435070 USB1Q9BQ65 265 aaKnown RBP7.2□□□□□ -1.26
CPSF6-202ENST00000435070 AARSD1Q9BTE6 412 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms