RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 GZMMP51124 257 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 C21orf58P58505 322 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 TDGQ13569 410 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 C10orf62Q5T681 223 aaPredicted RBP15.97■□□□□ 0.15
USHBP1-203ENST00000431146 FAM180BQ6P0A1 224 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 MSANTD1Q6ZTZ1 278 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 RBM12BQ8IXT5 1001 aaKnown RBP15.97■□□□□ 0.15
USHBP1-203ENST00000431146 DNAJB8Q8NHS0 232 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 FBXO30Q8TB52 745 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 AGPAT4Q9NRZ5 378 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 SPHK1Q9NYA1 384 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 USP36Q9P275 1121 aaKnown RBP15.97■□□□□ 0.15
USHBP1-203ENST00000431146 ADGRE2Q9UHX3 823 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 KLHL20Q9Y2M5 609 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 PCDHGA4Q9Y5G9 962 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 TDRD6O60522 2096 aaKnown RBP15.97■□□□□ 0.15
USHBP1-203ENST00000431146 MDC1Q14676 2089 aaKnown RBP15.97■□□□□ 0.15
USHBP1-203ENST00000431146 CLIC1O00299 241 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 CXCR6O00574 342 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 KCNJ13O60928 360 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 GMNNO75496 209 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 SERPIND1P05546 499 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 HOXC4P09017 264 aaPredicted RBP15.97■□□□□ 0.15
USHBP1-203ENST00000431146 C7P10643 843 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 ENGP17813 658 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 ACTR1BP42025 376 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 POLE2P56282 527 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 ACTR1AP61163 376 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 CSNK1G2P78368 415 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 REEP5Q00765 189 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 PRKCQQ04759 706 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 C2orf80Q0P641 193 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 C6orf52Q5T4I8 152 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 ENPP6Q6UWR7 440 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 Q6ZSR6 202 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 SLC9B2Q86UD5 537 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 CALHM3Q86XJ0 350 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 MICU2Q8IYU8 434 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 GOLM1Q8NBJ4 401 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 OR13H1Q8NG92 308 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 OR2L8Q8NGY9 312 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.97■□□□□ 0.15
USHBP1-203ENST00000431146 NCLNQ969V3 563 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 CIDECQ96AQ7 238 aaPredicted RBP15.97■□□□□ 0.15
USHBP1-203ENST00000431146 TOE1Q96GM8 510 aaKnown RBP15.97■□□□□ 0.15
USHBP1-203ENST00000431146 CCDC115Q96NT0 180 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 MVB12BQ9H7P6 319 aa15.97■□□□□ 0.15
USHBP1-203ENST00000431146 LAMA1P25391 3075 aa15.96■□□□□ 0.15
USHBP1-203ENST00000431146 MYO15AQ9UKN7 3530 aa15.96■□□□□ 0.15
USHBP1-203ENST00000431146 PDLIM1O00151 329 aa15.96■□□□□ 0.15
USHBP1-203ENST00000431146 SOCS2O14508 198 aa15.96■□□□□ 0.15
USHBP1-203ENST00000431146 IGHV4-34P06331 123 aa15.96■□□□□ 0.15
USHBP1-203ENST00000431146 IL3P08700 152 aa15.96■□□□□ 0.15
USHBP1-203ENST00000431146 CHRNB1P11230 501 aa15.96■□□□□ 0.15
USHBP1-203ENST00000431146 PCSK2P16519 638 aa15.96■□□□□ 0.15
USHBP1-203ENST00000431146 FASP25445 335 aa15.96■□□□□ 0.15
USHBP1-203ENST00000431146 PEBP1P30086 187 aaKnown RBP15.96■□□□□ 0.15
USHBP1-203ENST00000431146 AKT2P31751 481 aa15.96■□□□□ 0.15
USHBP1-203ENST00000431146 TRPC1P48995 793 aa15.96■□□□□ 0.15
USHBP1-203ENST00000431146 PRDX1Q06830 199 aaKnown RBP15.96■□□□□ 0.15
USHBP1-203ENST00000431146 PRSS53Q2L4Q9 553 aa15.96■□□□□ 0.15
USHBP1-203ENST00000431146 ALG11Q2TAA5 492 aa15.96■□□□□ 0.15
USHBP1-203ENST00000431146 IRAK1BP1Q5VVH5 260 aa15.96■□□□□ 0.15
USHBP1-203ENST00000431146 FAM160A2Q8N612 972 aaPredicted RBP15.96■□□□□ 0.15
USHBP1-203ENST00000431146 OR4E2Q8NGC2 313 aa15.96■□□□□ 0.15
USHBP1-203ENST00000431146 RLN3Q8WXF3 142 aa15.96■□□□□ 0.15
USHBP1-203ENST00000431146 FAM162AQ96A26 154 aa15.96■□□□□ 0.15
USHBP1-203ENST00000431146 MACROD1Q9BQ69 325 aa15.96■□□□□ 0.15
USHBP1-203ENST00000431146 RHBGQ9H310 441 aa15.96■□□□□ 0.15
USHBP1-203ENST00000431146 REEP4Q9H6H4 257 aa15.96■□□□□ 0.15
USHBP1-203ENST00000431146 POLMQ9NP87 494 aaPredicted RBP15.96■□□□□ 0.15
USHBP1-203ENST00000431146 COLQQ9Y215 455 aaPredicted RBP15.96■□□□□ 0.15
USHBP1-203ENST00000431146 LRP4O75096 1905 aa15.96■□□□□ 0.14
USHBP1-203ENST00000431146 TMEM265A0A087WTH1 108 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 A0A0G2JN53 185 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 C7orf72A4D263 438 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 BMP2P12643 396 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 CXCR2P25025 360 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 TPP2P29144 1249 aaPredicted RBP15.95■□□□□ 0.14
USHBP1-203ENST00000431146 SRP54P61011 504 aaKnown RBP15.95■□□□□ 0.14
USHBP1-203ENST00000431146 MED21Q13503 144 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 ZNF542PQ5EBM4 170 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 KHDRBS2Q5VWX1 349 aaKnown RBP15.95■□□□□ 0.14
USHBP1-203ENST00000431146 ISLR2Q6UXK2 745 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 EPHX4Q8IUS5 362 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 FBXL6Q8N531 539 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 TMEM145Q8NBT3 493 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 OR10Q1Q8NGQ4 319 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 NETO1Q8TDF5 533 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 STARD8Q92502 1023 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 COQ8BQ96D53 544 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 PRPF18Q99633 342 aaKnown RBP15.95■□□□□ 0.14
USHBP1-203ENST00000431146 DPH2Q9BQC3 489 aaPredicted RBP15.95■□□□□ 0.14
USHBP1-203ENST00000431146 CHID1Q9BWS9 393 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 MS4A8Q9BY19 250 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 ZNF717Q9BY31 904 aaPredicted RBP15.95■□□□□ 0.14
USHBP1-203ENST00000431146 SLC2A4RGQ9NR83 387 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 SIRT5Q9NXA8 310 aa15.95■□□□□ 0.14
USHBP1-203ENST00000431146 ZNF624Q9P2J8 865 aaPredicted RBP15.95■□□□□ 0.14
USHBP1-203ENST00000431146 SPASTQ9UBP0 616 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms