RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 TMEM198Q66K66 360 aa9.62□□□□□ -0.87
ATG4B-212ENST00000430617 TTC19Q6DKK2 380 aaPredicted RBP9.62□□□□□ -0.87
ATG4B-212ENST00000430617 MTFR2Q6P444 385 aa9.62□□□□□ -0.87
ATG4B-212ENST00000430617 TMEM220Q6QAJ8 160 aa9.62□□□□□ -0.87
ATG4B-212ENST00000430617 CRTC3Q6UUV7 619 aa9.62□□□□□ -0.87
ATG4B-212ENST00000430617 SBSNQ6UWP8 590 aa9.62□□□□□ -0.87
ATG4B-212ENST00000430617 NAPRTQ6XQN6 538 aa9.62□□□□□ -0.87
ATG4B-212ENST00000430617 NCCRP1Q6ZVX7 275 aaPredicted RBP9.62□□□□□ -0.87
ATG4B-212ENST00000430617 OTOAQ7RTW8 1153 aa9.62□□□□□ -0.87
ATG4B-212ENST00000430617 PPP1R32Q7Z5V6 425 aa9.62□□□□□ -0.87
ATG4B-212ENST00000430617 ISCA2Q86U28 154 aa9.62□□□□□ -0.87
ATG4B-212ENST00000430617 KMT5CQ86Y97 462 aa9.62□□□□□ -0.87
ATG4B-212ENST00000430617 TRAPPC5Q8IUR0 188 aa9.62□□□□□ -0.87
ATG4B-212ENST00000430617 VRK3Q8IV63 474 aa9.62□□□□□ -0.87
ATG4B-212ENST00000430617 CHDHQ8NE62 594 aaPredicted RBP9.62□□□□□ -0.87
ATG4B-212ENST00000430617 OR6Y1Q8NGX8 325 aa9.62□□□□□ -0.87
ATG4B-212ENST00000430617 RHEBL1Q8TAI7 183 aa9.62□□□□□ -0.87
ATG4B-212ENST00000430617 HM13Q8TCT9 377 aa9.62□□□□□ -0.87
ATG4B-212ENST00000430617 EEF1AKMT1Q8WVE0 214 aa9.62□□□□□ -0.87
ATG4B-212ENST00000430617 KIAA1191Q96A73 305 aa9.62□□□□□ -0.87
ATG4B-212ENST00000430617 MAGEB18Q96M61 343 aa9.62□□□□□ -0.87
ATG4B-212ENST00000430617 TREX2Q9BQ50 279 aaPredicted RBP9.62□□□□□ -0.87
ATG4B-212ENST00000430617 MRPL57Q9BQC6 102 aaKnown RBP9.62□□□□□ -0.87
ATG4B-212ENST00000430617 ALG9Q9H6U8 611 aa9.62□□□□□ -0.87
ATG4B-212ENST00000430617 ATP13A2Q9NQ11 1180 aa9.62□□□□□ -0.87
ATG4B-212ENST00000430617 POT1Q9NUX5 634 aa9.62□□□□□ -0.87
ATG4B-212ENST00000430617 MID2Q9UJV3 735 aa9.62□□□□□ -0.87
ATG4B-212ENST00000430617 RUVBL2Q9Y230 463 aaKnown RBP9.62□□□□□ -0.87
ATG4B-212ENST00000430617 DNAJC16Q9Y2G8 782 aa9.62□□□□□ -0.87
ATG4B-212ENST00000430617 TLCD2A6NGC4 264 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 PDZK1P1A8MUH7 402 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 CDC7O00311 574 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 BTN3A1O00481 513 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 PEX12O00623 359 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 KLF11O14901 512 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 KPNA5O15131 536 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 CNOT3O75175 753 aaKnown RBP9.61□□□□□ -0.87
ATG4B-212ENST00000430617 SLCO2B1O94956 709 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 C8BP07358 591 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 RBP1P09455 135 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 MPC1LP0DKB6 136 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 ATXN8OSP0DMR3 200 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 MTHFD2P13995 350 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 FOSL1P15407 271 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 MST1P26927 711 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 ALDH3A1P30838 453 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 RGS4P49798 205 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 DMPKQ09013 629 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 TLR1Q15399 786 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 TSNQ15631 228 aaKnown RBP9.61□□□□□ -0.87
ATG4B-212ENST00000430617 RPUSD3Q6P087 351 aaKnown RBP9.61□□□□□ -0.87
ATG4B-212ENST00000430617 KLC3Q6P597 504 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 CYHR1Q6ZMK1 362 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 NEK10Q6ZWH5 1172 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 LRRTM4Q86VH4 590 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 SLC22A15Q8IZD6 547 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 LILRA3Q8N6C8 439 aaPredicted RBP9.61□□□□□ -0.87
ATG4B-212ENST00000430617 OR8K5Q8NH50 307 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 OR1L3Q8NH93 324 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 RAB3IL1Q8TBN0 382 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 DYDC1Q8WWB3 177 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 ELMO1Q92556 727 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 SCYL1Q96KG9 808 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 MAGEB10Q96LZ2 347 aaPredicted RBP9.61□□□□□ -0.87
ATG4B-212ENST00000430617 IP6K3Q96PC2 410 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 ZNF317Q96PQ6 595 aaPredicted RBP9.61□□□□□ -0.87
ATG4B-212ENST00000430617 CCM2Q9BSQ5 444 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 RMI1Q9H9A7 625 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 COG4Q9H9E3 785 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 ACTR5Q9H9F9 607 aaPredicted RBP9.61□□□□□ -0.87
ATG4B-212ENST00000430617 CCM2LQ9NUG4 571 aaPredicted RBP9.61□□□□□ -0.87
ATG4B-212ENST00000430617 CPSF2Q9P2I0 782 aaKnown RBP9.61□□□□□ -0.87
ATG4B-212ENST00000430617 BTRCQ9Y297 605 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 WDR37Q9Y2I8 494 aa9.61□□□□□ -0.87
ATG4B-212ENST00000430617 PTRH2Q9Y3E5 179 aaKnown RBP9.61□□□□□ -0.87
ATG4B-212ENST00000430617 C17orf113A0A1B0GUU1 675 aa9.6□□□□□ -0.87
ATG4B-212ENST00000430617 MGAT4DA6NG13 374 aa9.6□□□□□ -0.87
ATG4B-212ENST00000430617 A8MT66 165 aa9.6□□□□□ -0.87
ATG4B-212ENST00000430617 LIN7AO14910 233 aaPredicted RBP9.6□□□□□ -0.87
ATG4B-212ENST00000430617 KLK8O60259 260 aa9.6□□□□□ -0.87
ATG4B-212ENST00000430617 DLX3O60479 287 aa9.6□□□□□ -0.87
ATG4B-212ENST00000430617 UMODP07911 640 aa9.6□□□□□ -0.87
ATG4B-212ENST00000430617 MYL2P10916 166 aa9.6□□□□□ -0.87
ATG4B-212ENST00000430617 CPA3P15088 417 aa9.6□□□□□ -0.87
ATG4B-212ENST00000430617 TAC1P20366 129 aa9.6□□□□□ -0.87
ATG4B-212ENST00000430617 BGNP21810 368 aa9.6□□□□□ -0.87
ATG4B-212ENST00000430617 PBLDP30039 288 aaPredicted RBP9.6□□□□□ -0.87
ATG4B-212ENST00000430617 PREPP48147 710 aa9.6□□□□□ -0.87
ATG4B-212ENST00000430617 KCNC1P48547 511 aa9.6□□□□□ -0.87
ATG4B-212ENST00000430617 CBX1P83916 185 aa9.6□□□□□ -0.87
ATG4B-212ENST00000430617 AIMP2Q13155 320 aaKnown RBP9.6□□□□□ -0.87
ATG4B-212ENST00000430617 SP140Q13342 867 aa9.6□□□□□ -0.87
ATG4B-212ENST00000430617 PLCL1Q15111 1095 aa9.6□□□□□ -0.87
ATG4B-212ENST00000430617 C3AR1Q16581 482 aa9.6□□□□□ -0.87
ATG4B-212ENST00000430617 SYTL3Q4VX76 610 aa9.6□□□□□ -0.87
ATG4B-212ENST00000430617 MLIPQ5VWP3 458 aa9.6□□□□□ -0.87
ATG4B-212ENST00000430617 FAAH2Q6GMR7 532 aa9.6□□□□□ -0.87
ATG4B-212ENST00000430617 ABRAXAS1Q6UWZ7 409 aa9.6□□□□□ -0.87
ATG4B-212ENST00000430617 FAM83HQ6ZRV2 1179 aaPredicted RBP9.6□□□□□ -0.87
ATG4B-212ENST00000430617 ADAMTSL2Q86TH1 951 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms