RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 SSX6Q7RTT6 188 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 PHYHIPQ92561 330 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 DCLRE1CQ96SD1 692 aaKnown RBP7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 KANSL3Q9P2N6 904 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 CRLS1Q9UJA2 301 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 SCML1Q9UN30 329 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 PRKAB1Q9Y478 270 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 COL22A1Q8NFW1 1626 aaPredicted RBP7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 MGAT4DA6NG13 374 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 NELFEP18615 380 aaKnown RBP7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 RPS12P25398 132 aaKnown RBP7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 HOXD11P31277 338 aaPredicted RBP7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 CD96P40200 585 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 NUMBP49757 651 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 TAS2R31P59538 309 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 HERVK_113P63132 956 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 FAM209AQ5JX71 171 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 ATG9BQ674R7 924 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 NAXDQ8IW45 347 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 OR4F6Q8NGB9 312 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 OR2T35Q8NGX2 323 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 TMEM80Q96HE8 168 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 ERVK-6Q9BXR3 956 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 EXOSC1Q9Y3B2 195 aaKnown RBP7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 SNED1Q8TER0 1413 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 SLC28A1O00337 649 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 LYRM1O43325 122 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 CILPO75339 1184 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 IRF1P10914 325 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 HAGHQ16775 308 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 PRAMEF18Q5VWM3 479 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 LYPLAL1Q5VWZ2 237 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 GEMIN6Q8WXD5 167 aaKnown RBP7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 MYRFLQ96LU7 910 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 PITHD1Q9GZP4 211 aaPredicted RBP7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 LILRB5O75023 590 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 ETFAP13804 333 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 NDST2P52849 883 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 MAT1AQ00266 395 aaKnown RBP7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 ALDH6A1Q02252 535 aaKnown RBP7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 SLC25A25Q6KCM7 469 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 XYLT1Q86Y38 959 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 DEFB106AQ8N104 65 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 LRRC58Q96CX6 371 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 MCMBPQ9BTE3 642 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 TMPRSS5Q9H3S3 457 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 V9GYS6 101 aa7.31□□□□□ -1.24
SYNPO2-202ENST00000429713 GNG14A0A1W2PPG7 69 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 H3BN98 237 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 EGFP01133 1207 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 TTPAP49638 278 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 SLC25A52Q3SY17 297 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 OVOS1Q6IE37 1185 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 TMEM200AQ86VY9 491 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 OR4D10Q8NGI6 311 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 ADAMTS19Q8TE59 1207 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 SCARB1Q8WTV0 552 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 GTF3C2Q8WUA4 911 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 CHRDQ9H2X0 955 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 FBXL4Q9UKA2 621 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 DNAJC13O75165 2243 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 DFFBO76075 338 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 RNH1P13489 461 aaKnown RBP7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 HCCSP53701 268 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 HTRA4P83105 476 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 DYRK1AQ13627 763 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 KCNJ11Q14654 390 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 DNLZQ5SXM8 178 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 RTL4Q6ZR62 310 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 GK5Q6ZS86 529 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 USP45Q70EL2 814 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 PIAS4Q8N2W9 510 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 CHDHQ8NE62 594 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 OR10A6Q8NH74 314 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 SERAC1Q96JX3 654 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 SPNS1Q9H2V7 528 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 NMRK2Q9NPI5 230 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 DLGAP4Q9Y2H0 992 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 LINC00862A6NCI5 91 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 RNF212BA8MTL3 300 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 HTR3BO95264 441 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 CYBBP04839 570 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 MPSTP25325 297 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 KCNJ5P48544 419 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 KCNC4Q03721 635 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 SMUG1Q53HV7 270 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 TMEM31Q5JXX7 168 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 H3F3CQ6NXT2 135 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 HSFY1Q96LI6 401 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 EDEM2Q9BV94 578 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 POPDC3Q9HBV1 291 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 ZNF112Q9UJU3 913 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 SHANK1Q9Y566 2161 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 BORCS7-ASMTA0A0B4J1R7 106 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 XPNPEP2O43895 674 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 IFNW1P05000 195 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 HGFP14210 728 aa7.3□□□□□ -1.24
SYNPO2-202ENST00000429713 NKX6-1P78426 367 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms