RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 SPRED1Q7Z699 444 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 C17orf82Q86X59 251 aaPredicted RBP9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 KIRREL3Q8IZU9 778 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 C1orf52Q8N6N3 182 aaKnown RBP9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 L3MBTL4Q8NA19 623 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 OR5T3Q8NGG3 340 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 IFI44Q8TCB0 444 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 VPS33AQ96AX1 596 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 MEAF6Q9HAF1 191 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 SOHLH2Q9NX45 425 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 NLGN3Q9NZ94 848 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 FAM149AA5PLN7 773 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 GYG2O15488 501 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 SMNDC1O75940 238 aaKnown RBP eCLIP9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 KLHL18O94889 574 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 FGF4P08620 206 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 ESRRAP11474 423 aaPredicted RBP9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 IL1RNP18510 177 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 ATP6V1C1P21283 382 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 IL12AP29459 219 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 DGKQP52824 942 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 ASPHQ12797 758 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 HYAL2Q12891 473 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 IMPG1Q17R60 797 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 SYT16Q17RD7 645 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 PRSS53Q2L4Q9 553 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 FIGLAQ6QHK4 219 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 LCTLQ6UWM7 567 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 KIAA2013Q8IYS2 634 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 TCAIMQ8N3R3 496 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 SLC39A3Q9BRY0 314 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 APMAPQ9HDC9 416 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 HEBP2Q9Y5Z4 205 aa9.1□□□□□ -0.95
HMGCLL1-206ENST00000428842 ZW10O43264 779 aa9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 H2AFYO75367 372 aaKnown RBP9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 SORBS2O94875 1100 aaKnown RBP9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 FOLR1P15328 257 aa9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 ACADSP16219 412 aa9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 GLB1P16278 677 aa9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 CCR8P51685 355 aa9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 RAP1GDS1P52306 607 aa9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 PKNOX1P55347 436 aa9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 RAE1P78406 368 aaKnown RBP9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 XKR7Q5GH72 579 aa9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 IL23RQ5VWK5 629 aa9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 ATG9BQ674R7 924 aa9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 GRHL2Q6ISB3 625 aa9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 ZCCHC8Q6NZY4 707 aaKnown RBP9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 MED27Q6P2C8 311 aa9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 OOSP2Q86WS3 158 aa9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 CLEC4FQ8N1N0 589 aa9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 USP7Q93009 1102 aa9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 TRMOQ9BU70 441 aa9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 ACTL8Q9H568 366 aa9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 IL1RL2Q9HB29 575 aa9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 LHX9Q9NQ69 397 aa9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 SLAMF8Q9P0V8 285 aa9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 GMPR2Q9P2T1 348 aaKnown RBP9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 STOML1Q9UBI4 398 aa9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 APOBEC2Q9Y235 224 aaKnown RBP9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 RELNP78509 3460 aa9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 MAP1BP46821 2468 aaKnown RBP9.09□□□□□ -0.95
HMGCLL1-206ENST00000428842 TEX51A0A1B0GUA7 166 aa9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 SPAARA0A1B0GVQ0 90 aa9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 A6NHS1 94 aa9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 C2orf74A8MZ97 194 aa9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 H0Y3Z8 333 aa9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 H0YGG7 62 aa9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 PLPP1O14494 284 aa9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 NUDT21O43809 227 aaKnown RBP9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 KCNJ13O60928 360 aa9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 CDC123O75794 336 aaPredicted RBP9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 TIAF1O95411 115 aa9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 CER1O95813 267 aa9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 KLK1P06870 262 aa9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 ALOX15P16050 662 aaPredicted RBP9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 CASP9P55211 416 aa9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 ARF3P61204 181 aaPredicted RBP9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 ZNF750Q32MQ0 723 aa9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 AASDHQ4L235 1098 aaPredicted RBP9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 DEFB134Q4QY38 66 aa9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 ZNF793Q6ZN11 406 aa9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 UBE3DQ7Z6J8 389 aa9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 ANKRD46Q86W74 232 aa9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 PAQR7Q86WK9 346 aa9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 OR8K5Q8NH50 307 aa9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 CEP76Q8TAP6 659 aa9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 CNDP2Q96KP4 475 aaKnown RBP9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 TEFMQ96QE5 360 aaKnown RBP9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 SPRTNQ9H040 489 aaPredicted RBP9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 STN1Q9H668 368 aaKnown RBP9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 AKIRIN1Q9H9L7 192 aaPredicted RBP9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 DMRT3Q9NQL9 472 aa9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 POMT2Q9UKY4 750 aa9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 MAU2Q9Y6X3 613 aa9.09□□□□□ -0.96
HMGCLL1-206ENST00000428842 PSMG1O95456 288 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 RETP07949 1114 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 SYPP08247 313 aa9.08□□□□□ -0.96
HMGCLL1-206ENST00000428842 ZNF806P0C7X5 589 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms