RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 LRRC46Q96FV0 321 aa5.38□□□□□ -1.55
C9orf3-205ENST00000427193 XPO6Q96QU8 1125 aaKnown RBP5.38□□□□□ -1.55
C9orf3-205ENST00000427193 TRIM51Q9BSJ1 452 aa5.38□□□□□ -1.55
C9orf3-205ENST00000427193 MLPHQ9BV36 600 aaPredicted RBP5.38□□□□□ -1.55
C9orf3-205ENST00000427193 SLC25A51Q9H1U9 297 aa5.38□□□□□ -1.55
C9orf3-205ENST00000427193 NEUROG2Q9H2A3 272 aa5.38□□□□□ -1.55
C9orf3-205ENST00000427193 C8orf33Q9H7E9 229 aaPredicted RBP5.38□□□□□ -1.55
C9orf3-205ENST00000427193 PLAC1Q9HBJ0 212 aa5.38□□□□□ -1.55
C9orf3-205ENST00000427193 TMEM9BQ9NQ34 198 aa5.38□□□□□ -1.55
C9orf3-205ENST00000427193 ELOVL2Q9NXB9 296 aa5.38□□□□□ -1.55
C9orf3-205ENST00000427193 PAK5Q9P286 719 aa5.38□□□□□ -1.55
C9orf3-205ENST00000427193 DEC1Q9P2X7 70 aa5.38□□□□□ -1.55
C9orf3-205ENST00000427193 THAP10Q9P2Z0 257 aaPredicted RBP5.38□□□□□ -1.55
C9orf3-205ENST00000427193 SLCO3A1Q9UIG8 710 aa5.38□□□□□ -1.55
C9orf3-205ENST00000427193 VPS28Q9UK41 221 aa5.38□□□□□ -1.55
C9orf3-205ENST00000427193 NYNRINQ9P2P1 1898 aaKnown RBP5.38□□□□□ -1.55
C9orf3-205ENST00000427193 MYO18AQ92614 2054 aaKnown RBP5.38□□□□□ -1.55
C9orf3-205ENST00000427193 ITPR3Q14573 2671 aa5.38□□□□□ -1.55
C9orf3-205ENST00000427193 KIAA1549LQ6ZVL6 1849 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 SPAARA0A1B0GVQ0 90 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 TSPAN11A1L157 253 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 TYW5A2RUC4 315 aaKnown RBP5.37□□□□□ -1.55
C9orf3-205ENST00000427193 RHPN2P1A8MT19 583 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.37□□□□□ -1.55
C9orf3-205ENST00000427193 H7C0C1 242 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 K7ERQ8 282 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 DNALI1O14645 258 aaPredicted RBP5.37□□□□□ -1.55
C9orf3-205ENST00000427193 ACOT8O14734 319 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 NPC1O15118 1278 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 GJB3O75712 270 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 RPP40O75818 363 aaKnown RBP5.37□□□□□ -1.55
C9orf3-205ENST00000427193 KRT38O76015 456 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 TMCC1O94876 653 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 TMEM63AO94886 807 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 KAT7O95251 611 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 AP2A1O95782 977 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 GSRP00390 522 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 IFNA2P01563 188 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 WNT1P04628 370 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 TUBBP07437 444 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 MLNP12872 115 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 H2AFXP16104 143 aaPredicted RBP5.37□□□□□ -1.55
C9orf3-205ENST00000427193 FDFT1P37268 417 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 TNFRSF4P43489 277 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 ATP5OP48047 213 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 STK19P49842 368 aaPredicted RBP5.37□□□□□ -1.55
C9orf3-205ENST00000427193 GEMIN4P57678 1058 aaKnown RBP5.37□□□□□ -1.55
C9orf3-205ENST00000427193 ECT2LQ008S8 904 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 EGR4Q05215 589 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 AP1B1Q10567 949 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 CUL1Q13616 776 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 ATP1A4Q13733 1029 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 MORF4L2Q15014 288 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 CDKN3Q16667 212 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 HNRNPA1L2Q32P51 320 aaKnown RBP5.37□□□□□ -1.55
C9orf3-205ENST00000427193 DNTTIP2Q5QJE6 756 aaKnown RBP5.37□□□□□ -1.55
C9orf3-205ENST00000427193 MARC1Q5VT66 337 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 ANKRD22Q5VYY1 191 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 ARMC3Q5W041 872 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 RETSATQ6NUM9 610 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 C8orf74Q6P047 294 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 NCEH1Q6PIU2 408 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 LINGO4Q6UY18 593 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 CCNI2Q6ZMN8 369 aaPredicted RBP5.37□□□□□ -1.55
C9orf3-205ENST00000427193 Q6ZS52 159 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 KIAA0408Q6ZU52 694 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 CCDC28AQ8IWP9 274 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 CHCHD4Q8N4Q1 142 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 PCDH20Q8N6Y1 951 aaKnown RBP5.37□□□□□ -1.55
C9orf3-205ENST00000427193 CCNYQ8ND76 341 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 OR2A12Q8NGT7 310 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 FBXO25Q8TCJ0 367 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 AENQ8WTP8 325 aaKnown RBP5.37□□□□□ -1.55
C9orf3-205ENST00000427193 FAM3CQ92520 227 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 MED30Q96HR3 178 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 NUDCD1Q96RS6 583 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 GABRG3Q99928 467 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 C19orf43Q9BQ61 176 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 NUDT22Q9BRQ3 303 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 FUT8Q9BYC5 575 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 PARD6BQ9BYG5 372 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 AAMDCQ9H7C9 122 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 NOD2Q9HC29 1040 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 DNAJC17Q9NVM6 304 aaKnown RBP5.37□□□□□ -1.55
C9orf3-205ENST00000427193 RBM22Q9NW64 420 aaKnown RBP eCLIP5.37□□□□□ -1.55
C9orf3-205ENST00000427193 UBA2Q9UBT2 640 aaPredicted RBP5.37□□□□□ -1.55
C9orf3-205ENST00000427193 CORO2BQ9UQ03 480 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 ERVW-1Q9UQF0 538 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 LAMP3Q9UQV4 416 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 PPIL1Q9Y3C6 166 aa5.37□□□□□ -1.55
C9orf3-205ENST00000427193 FLNCQ14315 2725 aa5.36□□□□□ -1.55
C9orf3-205ENST00000427193 A0A087WV48 116 aa5.36□□□□□ -1.55
C9orf3-205ENST00000427193 A0A1W2PQF6 199 aa5.36□□□□□ -1.55
C9orf3-205ENST00000427193 SGK1O00141 431 aa5.36□□□□□ -1.55
C9orf3-205ENST00000427193 ALOX15BO15296 676 aa5.36□□□□□ -1.55
C9orf3-205ENST00000427193 RHOBTB1O94844 696 aa5.36□□□□□ -1.55
C9orf3-205ENST00000427193 HEXIM1O94992 359 aaKnown RBP5.36□□□□□ -1.55
C9orf3-205ENST00000427193 CTSLP07711 333 aa5.36□□□□□ -1.55
C9orf3-205ENST00000427193 RFPL3SP0C7P2 107 aa5.36□□□□□ -1.55
C9orf3-205ENST00000427193 FGF3P11487 239 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms