RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 STAMBPO95630 424 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 SPINK2P20155 84 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 PKLRP30613 574 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 SHMT2P34897 504 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 VHLP40337 213 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 PTDSS1P48651 473 aaKnown RBP14.99□□□□□ -0.01
SHOX2-202ENST00000425436 RAB28P51157 221 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 PDX1P52945 283 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 PCDH1Q08174 1060 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 TARDBPQ13148 414 aaKnown RBP eCLIP14.99□□□□□ -0.011e-7■■■□□ 15.9
SHOX2-202ENST00000425436 AP5B1Q2VPB7 878 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 PTCHD3Q3KNS1 767 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 PHF19Q5T6S3 580 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 LIPJQ5W064 366 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 ARMC6Q6NXE6 501 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 TMEM71Q6P5X7 295 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 KLHL35Q6PF15 583 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 WDR74Q6RFH5 385 aaPredicted RBP14.99□□□□□ -0.01
SHOX2-202ENST00000425436 OOSP2Q86WS3 158 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 LINC01555Q8NAE3 123 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 RCBTB1Q8NDN9 531 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 WDR48Q8TAF3 677 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 PPM1MQ96MI6 270 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 EPB41L1Q9H4G0 881 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 ASIC5Q9NY37 505 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 ADA2Q9NZK5 511 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 C15orf41Q9Y2V0 281 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 KIF26BQ2KJY2 2108 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 KNTC1P50748 2209 aa14.99□□□□□ -0.01
SHOX2-202ENST00000425436 IGHV5-10-1A0A0J9YXX1 117 aa14.98□□□□□ -0.01
SHOX2-202ENST00000425436 MANBAO00462 879 aa14.98□□□□□ -0.01
SHOX2-202ENST00000425436 NR5A2O00482 541 aa14.98□□□□□ -0.01
SHOX2-202ENST00000425436 KDM1AO60341 852 aa14.98□□□□□ -0.01
SHOX2-202ENST00000425436 CSO75390 466 aaKnown RBP14.98□□□□□ -0.01
SHOX2-202ENST00000425436 SLC16A8O95907 504 aa14.98□□□□□ -0.01
SHOX2-202ENST00000425436 CHRM5P08912 532 aaPredicted RBP14.98□□□□□ -0.01
SHOX2-202ENST00000425436 RCAN2Q14206 197 aa14.98□□□□□ -0.01
SHOX2-202ENST00000425436 ABRAXAS2Q15018 415 aa14.98□□□□□ -0.01
SHOX2-202ENST00000425436 IMPG1Q17R60 797 aa14.98□□□□□ -0.01
SHOX2-202ENST00000425436 ISXQ2M1V0 245 aa14.98□□□□□ -0.01
SHOX2-202ENST00000425436 CACHD1Q5VU97 1274 aa14.98□□□□□ -0.01
SHOX2-202ENST00000425436 C8orf82Q6P1X6 216 aaPredicted RBP14.98□□□□□ -0.01
SHOX2-202ENST00000425436 TMPRSS12Q86WS5 348 aa14.98□□□□□ -0.01
SHOX2-202ENST00000425436 PLXDC1Q8IUK5 500 aa14.98□□□□□ -0.01
SHOX2-202ENST00000425436 GLB1L3Q8NCI6 653 aaPredicted RBP14.98□□□□□ -0.01
SHOX2-202ENST00000425436 OR4D9Q8NGE8 314 aa14.98□□□□□ -0.01
SHOX2-202ENST00000425436 OR2T11Q8NH01 316 aa14.98□□□□□ -0.01
SHOX2-202ENST00000425436 SLC26A7Q8TE54 656 aa14.98□□□□□ -0.01
SHOX2-202ENST00000425436 CCDC124Q96CT7 223 aaKnown RBP14.98□□□□□ -0.01
SHOX2-202ENST00000425436 SPDL1Q96EA4 605 aa14.98□□□□□ -0.01
SHOX2-202ENST00000425436 ZBTB18Q99592 522 aa14.98□□□□□ -0.01
SHOX2-202ENST00000425436 VCX3BQ9H321 246 aa14.98□□□□□ -0.01
SHOX2-202ENST00000425436 SUCOQ9UBS9 1254 aaKnown RBP14.98□□□□□ -0.01
SHOX2-202ENST00000425436 LEF1Q9UJU2 399 aaPredicted RBP14.98□□□□□ -0.01
SHOX2-202ENST00000425436 ZNF490Q9ULM2 529 aaPredicted RBP14.98□□□□□ -0.01
SHOX2-202ENST00000425436 LRRC42Q9Y546 428 aa14.98□□□□□ -0.01
SHOX2-202ENST00000425436 PIPSLA2A3N6 862 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 CCDC154A6NI56 674 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 ISM1B1AKI9 464 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 NPIPB8E9PQR5 432 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 BCAS2O75934 225 aaPredicted RBP14.97□□□□□ -0.01
SHOX2-202ENST00000425436 ANPEPP15144 967 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 ACPPP15309 386 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 CD1EP15812 388 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 PEBP1P30086 187 aaKnown RBP14.97□□□□□ -0.01
SHOX2-202ENST00000425436 POLR2JP52435 117 aaKnown RBP14.97□□□□□ -0.01
SHOX2-202ENST00000425436 DIO3P55073 304 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 TSTA3Q13630 321 aaPredicted RBP14.97□□□□□ -0.01
SHOX2-202ENST00000425436 CCNIQ14094 377 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 TRIM25Q14258 630 aaKnown RBP14.97□□□□□ -0.01
SHOX2-202ENST00000425436 SCIMPQ6UWF3 145 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 SUSD1Q6UWL2 747 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 TMPRSS7Q7RTY8 843 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 SLITRK4Q8IW52 837 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 FAM20CQ8IXL6 584 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 DCBLD1Q8N8Z6 715 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 OR9I1Q8NGQ6 314 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 OR2L8Q8NGY9 312 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 ZNF480Q8WV37 535 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 ASB9Q96DX5 294 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 ZDHHC12Q96GR4 267 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 CCDC74BQ96LY2 380 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 ELOVL6Q9H5J4 265 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 ACTR10Q9NZ32 417 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 GPRC5BQ9NZH0 403 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 OR6C2Q9NZP2 312 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 TMEM181Q9P2C4 612 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 TMED5Q9Y3A6 229 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 RNF11Q9Y3C5 154 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 CCL27Q9Y4X3 112 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 ENTPD2Q9Y5L3 495 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 C15orf38-AP3S2A0A0A6YYH1 394 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 FAM221BA6H8Z2 402 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 EEDO75530 441 aaKnown RBP14.97□□□□□ -0.01
SHOX2-202ENST00000425436 RSL1D1O76021 490 aaKnown RBP14.97□□□□□ -0.01
SHOX2-202ENST00000425436 C9P02748 559 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 JAK1P23458 1154 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 PRPH2P23942 346 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 MAPK1P28482 360 aa14.97□□□□□ -0.01
SHOX2-202ENST00000425436 PNLIPRP1P54315 467 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms