RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 RBBP8Q99708 897 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 CPNE1Q99829 537 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 EGFL8Q99944 293 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 ZNF700Q9H0M5 742 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 PTGFRNQ9P2B2 879 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 TRPC4Q9UBN4 977 aa12.28□□□□□ -0.44
VRK3-203ENST00000424804 CSMD2Q7Z408 3487 aa12.27□□□□□ -0.44
VRK3-203ENST00000424804 A0A0A6YYC8 382 aaPredicted RBP12.27□□□□□ -0.45
VRK3-203ENST00000424804 NSG1A0A0A6YYJ2 146 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 FAM159BA6NKW6 160 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 I3L1I5 382 aaPredicted RBP12.27□□□□□ -0.45
VRK3-203ENST00000424804 CDC7O00311 574 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 ZG16O60844 167 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 JRKO75564 520 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 BMP10O95393 424 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 TSPAN12O95859 305 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 STATHP02808 62 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 GSTA2P09210 222 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 ZNF37AP17032 561 aaPredicted RBP12.27□□□□□ -0.45
VRK3-203ENST00000424804 MST1P26927 711 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 SPRP35270 261 aaPredicted RBP12.27□□□□□ -0.45
VRK3-203ENST00000424804 GP5P40197 560 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 MAT1AQ00266 395 aaKnown RBP12.27□□□□□ -0.45
VRK3-203ENST00000424804 SRSF11Q05519 484 aaKnown RBP12.27□□□□□ -0.45
VRK3-203ENST00000424804 EEF1A2Q05639 463 aaKnown RBP12.27□□□□□ -0.45
VRK3-203ENST00000424804 FAM53BQ14153 422 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 NAA25Q14CX7 972 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 ZXDCQ2QGD7 858 aaPredicted RBP12.27□□□□□ -0.45
VRK3-203ENST00000424804 FAAH2Q6GMR7 532 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 RAPH1Q70E73 1250 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 PRSS41Q7RTY9 318 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 PYCR2Q96C36 320 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 TM4SF19Q96DZ7 209 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 MMABQ96EY8 250 aaPredicted RBP12.27□□□□□ -0.45
VRK3-203ENST00000424804 TSPAN17Q96FV3 270 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 CABS1Q96KC9 395 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 PHACTR1Q9C0D0 580 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 MKKSQ9NPJ1 570 aaPredicted RBP12.27□□□□□ -0.45
VRK3-203ENST00000424804 ZDHHC18Q9NUE0 388 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 CTNNAL1Q9UBT7 734 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 IKZF3Q9UKT9 509 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 CDC14AQ9UNH5 594 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 SH2B3Q9UQQ2 575 aa12.27□□□□□ -0.45
VRK3-203ENST00000424804 OR2W5A6NFC9 320 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 H7BY64 318 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 WDPCPO95876 746 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 F10P00742 488 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 RHOXF2BP0C7M4 288 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 EZRP15311 586 aaKnown RBP12.26□□□□□ -0.45
VRK3-203ENST00000424804 STMN1P16949 149 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 PHBP35232 272 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 KCNK10P57789 538 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 POU4F1Q01851 419 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 CBLBQ13191 982 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 TSNQ15631 228 aaKnown RBP12.26□□□□□ -0.45
VRK3-203ENST00000424804 CEP128Q6ZU80 1094 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 C17orf64Q86WR6 236 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 BCORP1Q8N888 145 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 ANKRD49Q8WVL7 239 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 NR4A3Q92570 626 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 EXT2Q93063 718 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 RERGQ96A58 199 aaPredicted RBP12.26□□□□□ -0.45
VRK3-203ENST00000424804 VPS50Q96JG6 964 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 PRAP1Q96NZ9 151 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 FMO2Q99518 471 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 NPAS2Q99743 824 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 MACROD1Q9BQ69 325 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 RHOXF2Q9BQY4 288 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 OLAHQ9NV23 265 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 C14orf105Q9NVL8 296 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 TEP1Q99973 2627 aaKnown RBP12.26□□□□□ -0.45
VRK3-203ENST00000424804 OTOGQ6ZRI0 2925 aa12.26□□□□□ -0.45
VRK3-203ENST00000424804 DCHS2Q6V1P9 2916 aa12.25□□□□□ -0.45
VRK3-203ENST00000424804 NCOA6Q14686 2063 aaPredicted RBP12.25□□□□□ -0.45
VRK3-203ENST00000424804 PKDREJQ9NTG1 2253 aa12.25□□□□□ -0.45
VRK3-203ENST00000424804 KCNE1BA0A087WTH5 132 aa12.25□□□□□ -0.45
VRK3-203ENST00000424804 NCF1BA6NI72 391 aaPredicted RBP12.25□□□□□ -0.45
VRK3-203ENST00000424804 NCF1CA8MVU1 366 aaPredicted RBP12.25□□□□□ -0.45
VRK3-203ENST00000424804 LCMT2O60294 686 aaKnown RBP12.25□□□□□ -0.45
VRK3-203ENST00000424804 ACSL3O95573 720 aa12.25□□□□□ -0.45
VRK3-203ENST00000424804 HEXBP07686 556 aa12.25□□□□□ -0.45
VRK3-203ENST00000424804 CCDC166P0CW27 439 aa12.25□□□□□ -0.45
VRK3-203ENST00000424804 CDH1P12830 882 aa12.25□□□□□ -0.45
VRK3-203ENST00000424804 NCF1P14598 390 aaPredicted RBP12.25□□□□□ -0.45
VRK3-203ENST00000424804 GMPRP36959 345 aa12.25□□□□□ -0.45
VRK3-203ENST00000424804 ARG2P78540 354 aa12.25□□□□□ -0.45
VRK3-203ENST00000424804 ABATP80404 500 aa12.25□□□□□ -0.45
VRK3-203ENST00000424804 BMPR2Q13873 1038 aa12.25□□□□□ -0.45
VRK3-203ENST00000424804 GLE1Q53GS7 698 aaKnown RBP12.25□□□□□ -0.45
VRK3-203ENST00000424804 GRTP1Q5TC63 336 aa12.25□□□□□ -0.45
VRK3-203ENST00000424804 IRAK1BP1Q5VVH5 260 aa12.25□□□□□ -0.45
VRK3-203ENST00000424804 SP5Q6BEB4 398 aaPredicted RBP12.25□□□□□ -0.45
VRK3-203ENST00000424804 CAPN13Q6MZZ7 669 aaPredicted RBP12.25□□□□□ -0.45
VRK3-203ENST00000424804 H3F3CQ6NXT2 135 aa12.25□□□□□ -0.45
VRK3-203ENST00000424804 RIPOR1Q6ZS17 1223 aa12.25□□□□□ -0.45
VRK3-203ENST00000424804 LANCL3Q6ZV70 420 aa12.25□□□□□ -0.45
VRK3-203ENST00000424804 FJX1Q86VR8 437 aa12.25□□□□□ -0.45
VRK3-203ENST00000424804 OR9A4Q8NGU2 314 aa12.25□□□□□ -0.45
VRK3-203ENST00000424804 UHMK1Q8TAS1 419 aaKnown RBP12.25□□□□□ -0.45
VRK3-203ENST00000424804 CYTH2Q99418 400 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms