RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 FAHP16930 419 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 BMP5P22003 454 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 GLRA2P23416 452 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 CCND1P24385 295 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 ARNTP27540 789 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 MC4RP32245 332 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 TBR1Q16650 682 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 HNRNPA1L2Q32P51 320 aaKnown RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 NDUFAF5Q5TEU4 345 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 ZNF787Q6DD87 383 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 FAM171BQ6P995 826 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 TMEM65Q6PI78 240 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 THSD4Q6ZMP0 1018 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 TMC3Q7Z5M5 1100 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 SGMS1Q86VZ5 419 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 CYP4Z1Q86W10 505 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 SLC13A5Q86YT5 568 aaPredicted RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 LRRC8AQ8IWT6 810 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 FAM20CQ8IXL6 584 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 FMR1NBQ8N0W7 255 aaPredicted RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 ANKS4BQ8N8V4 417 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 TMIEQ8NEW7 156 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 RP9Q8TA86 221 aaKnown RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 ABTB1Q969K4 478 aaPredicted RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 RCC1LQ96I51 464 aaKnown RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 SEC16BQ96JE7 1060 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 FAM129BQ96TA1 746 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 NPAS2Q99743 824 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 YIPF3Q9GZM5 350 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 MYLK2Q9H1R3 596 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 C6orf106Q9H6K1 298 aaPredicted RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 THAP10Q9P2Z0 257 aaPredicted RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 TSPAN16Q9UKR8 245 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 RNF114Q9Y508 228 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 MTCL1Q9Y4B5 1905 aaKnown RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 ITPR3Q14573 2671 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 PATE3B3GLJ2 98 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 F2RL2O00254 374 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 AIM2O14862 343 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 MTHFD1P11586 935 aaKnown RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 IL3RAP26951 378 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 HNF4AP41235 474 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 RAP1GAPP47736 663 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 OR1D5P58170 312 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 MBTD1Q05BQ5 628 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 LRRC63Q05C16 580 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 BNIP1Q12981 228 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 GAS6Q14393 721 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 NUMA1Q14980 2115 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 POU4F3Q15319 338 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 DMRTC1Q5HYR2 192 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 ZNF783Q6ZMS7 281 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 C10orf67Q8IYJ2 551 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 ANKFN1Q8N957 763 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 ZNF398Q8TD17 642 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 WNT8BQ93098 351 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 PURBQ96QR8 312 aaKnown RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 NKX3-1Q99801 234 aaPredicted RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 OR8D2Q9GZM6 311 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 EBF2Q9HAK2 575 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 BRF2Q9HAW0 419 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 PLAC1Q9HBJ0 212 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 ITM2CQ9NQX7 267 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 PIGVQ9NUD9 493 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 RNF19AQ9NV58 838 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 WSB2Q9NYS7 404 aaPredicted RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 MOCS1Q9NZB8 636 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 FAM153AQ9UHL3 310 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 TP53TG5Q9Y2B4 290 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 SETXQ7Z333 2677 aaKnown RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 LNP1A1A4G5 178 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 GPR89AB7ZAQ6 455 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 ANKRD28O15084 1053 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 CEP104O60308 925 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 PLOD3O60568 738 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 CREG1O75629 220 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 RGS20O76081 388 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 TTC4O95801 387 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 IFNA14P01570 189 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 GPR89BP0CG08 455 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 TROVE2P10155 538 aaKnown RBP eCLIP3.41□□□□□ -1.862e-8■■■■■ 40.7
TOP2A-201ENST00000423485 G6PDP11413 515 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 MYCLP1P12525 358 aaPredicted RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 RNH1P13489 461 aaKnown RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 EPHA3P29320 983 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 RPS6KA3P51812 740 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 CSNK2A1P68400 391 aaPredicted RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 CAPSQ13938 189 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 ITIH4Q14624 930 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 MESDQ14696 234 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 ZCWPW2Q504Y3 356 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 PDCD4Q53EL6 469 aaKnown RBP3.41□□□□□ -1.86
TOP2A-201ENST00000423485 TMEM196Q5HYL7 178 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 GRHL2Q6ISB3 625 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 NANOGP8Q6NSW7 305 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 EMBQ6PCB8 327 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 CROCCP3Q8IVE0 287 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 RBFAQ8N0V3 343 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 FTMTQ8N4E7 242 aa3.41□□□□□ -1.86
TOP2A-201ENST00000423485 METTL27Q8N6F8 245 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms