RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 ZSCAN12O43309 604 aa16.35■□□□□ 0.21
MSH6-203ENST00000420813 HNRNPRO43390 633 aaKnown RBP16.35■□□□□ 0.21
MSH6-203ENST00000420813 UNC5CO95185 931 aa16.35■□□□□ 0.21
MSH6-203ENST00000420813 MST1P26927 711 aa16.35■□□□□ 0.21
MSH6-203ENST00000420813 MORF4L2Q15014 288 aa16.35■□□□□ 0.21
MSH6-203ENST00000420813 ABRAXAS2Q15018 415 aa16.35■□□□□ 0.21
MSH6-203ENST00000420813 NSDHLQ15738 373 aa16.35■□□□□ 0.21
MSH6-203ENST00000420813 BBS9Q3SYG4 887 aa16.35■□□□□ 0.21
MSH6-203ENST00000420813 ZNF766Q5HY98 468 aa16.35■□□□□ 0.21
MSH6-203ENST00000420813 TEDDM1Q5T9Z0 273 aa16.35■□□□□ 0.21
MSH6-203ENST00000420813 HECTD2Q5U5R9 776 aa16.35■□□□□ 0.21
MSH6-203ENST00000420813 FAM45BPQ6NSW5 357 aa16.35■□□□□ 0.21
MSH6-203ENST00000420813 PAPD4Q6PIY7 484 aaKnown RBP16.35■□□□□ 0.21
MSH6-203ENST00000420813 TMEM207Q6UWW9 146 aa16.35■□□□□ 0.21
MSH6-203ENST00000420813 IGDCC3Q8IVU1 814 aa16.35■□□□□ 0.21
MSH6-203ENST00000420813 PDIK1LQ8N165 341 aa16.35■□□□□ 0.21
MSH6-203ENST00000420813 BEST3Q8N1M1 668 aa16.35■□□□□ 0.21
MSH6-203ENST00000420813 FAM45AQ8TCE6 357 aa16.35■□□□□ 0.21
MSH6-203ENST00000420813 PYCR2Q96C36 320 aa16.35■□□□□ 0.21
MSH6-203ENST00000420813 LRRC39Q96DD0 335 aa16.35■□□□□ 0.21
MSH6-203ENST00000420813 PEX11GQ96HA9 241 aa16.35■□□□□ 0.21
MSH6-203ENST00000420813 PDLIM5Q96HC4 596 aaKnown RBP16.35■□□□□ 0.21
MSH6-203ENST00000420813 OR4K3Q96R72 315 aa16.35■□□□□ 0.21
MSH6-203ENST00000420813 LPAR4Q99677 370 aa16.35■□□□□ 0.21
MSH6-203ENST00000420813 PLAC1Q9HBJ0 212 aa16.35■□□□□ 0.21
MSH6-203ENST00000420813 COPG2Q9UBF2 871 aa16.35■□□□□ 0.21
MSH6-203ENST00000420813 SUCOQ9UBS9 1254 aaKnown RBP16.35■□□□□ 0.21
MSH6-203ENST00000420813 VWA7Q9Y334 891 aa16.35■□□□□ 0.21
MSH6-203ENST00000420813 OR2W5A6NFC9 320 aa16.34■□□□□ 0.21
MSH6-203ENST00000420813 ENO4A6NNW6 628 aa16.34■□□□□ 0.21
MSH6-203ENST00000420813 CDK2AP1O14519 115 aa16.34■□□□□ 0.21
MSH6-203ENST00000420813 NDUFS4O43181 175 aa16.34■□□□□ 0.21
MSH6-203ENST00000420813 OR1F1O43749 312 aa16.34■□□□□ 0.21
MSH6-203ENST00000420813 GALR3O60755 368 aaPredicted RBP16.34■□□□□ 0.21
MSH6-203ENST00000420813 TCP1P17987 556 aaKnown RBP16.34■□□□□ 0.21
MSH6-203ENST00000420813 ALOX12P18054 663 aa16.34■□□□□ 0.21
MSH6-203ENST00000420813 IVDP26440 423 aa16.34■□□□□ 0.21
MSH6-203ENST00000420813 AHRP35869 848 aa16.34■□□□□ 0.21
MSH6-203ENST00000420813 RBPJQ06330 500 aa16.34■□□□□ 0.21
MSH6-203ENST00000420813 SFT2D3Q587I9 215 aa16.34■□□□□ 0.21
MSH6-203ENST00000420813 MTFR2Q6P444 385 aa16.34■□□□□ 0.21
MSH6-203ENST00000420813 CRLF3Q8IUI8 442 aa16.34■□□□□ 0.21
MSH6-203ENST00000420813 LGI4Q8N135 537 aa16.34■□□□□ 0.21
MSH6-203ENST00000420813 GPATCH11Q8N954 259 aa16.34■□□□□ 0.21
MSH6-203ENST00000420813 ZNF740Q8NDX6 193 aa16.34■□□□□ 0.21
MSH6-203ENST00000420813 MDS2Q8NDY4 140 aa16.34■□□□□ 0.21
MSH6-203ENST00000420813 NT5CQ8TCD5 201 aa16.34■□□□□ 0.21
MSH6-203ENST00000420813 TBC1D20Q96BZ9 403 aa16.34■□□□□ 0.21
MSH6-203ENST00000420813 UTP23Q9BRU9 249 aaKnown RBP16.34■□□□□ 0.21
MSH6-203ENST00000420813 PPANQ9NQ55 473 aaKnown RBP16.34■□□□□ 0.21
MSH6-203ENST00000420813 SLC17A6Q9P2U8 582 aa16.34■□□□□ 0.21
MSH6-203ENST00000420813 ZFP69BQ9UJL9 534 aa16.34■□□□□ 0.21
MSH6-203ENST00000420813 ZNF860A6NHJ4 632 aa16.33■□□□□ 0.2
MSH6-203ENST00000420813 FHP07954 510 aa16.33■□□□□ 0.2
MSH6-203ENST00000420813 JAK1P23458 1154 aa16.33■□□□□ 0.2
MSH6-203ENST00000420813 ELK3P41970 407 aa16.33■□□□□ 0.2
MSH6-203ENST00000420813 CA7P43166 264 aa16.33■□□□□ 0.2
MSH6-203ENST00000420813 TAS2R50P59544 299 aa16.33■□□□□ 0.2
MSH6-203ENST00000420813 MEF2AQ02078 507 aaPredicted RBP16.33■□□□□ 0.2
MSH6-203ENST00000420813 ACTN3Q08043 901 aaPredicted RBP16.33■□□□□ 0.2
MSH6-203ENST00000420813 RGS1Q08116 209 aa16.33■□□□□ 0.2
MSH6-203ENST00000420813 ART3Q13508 389 aa16.33■□□□□ 0.2
MSH6-203ENST00000420813 TUBA3CQ13748 450 aa16.33■□□□□ 0.2
MSH6-203ENST00000420813 FRG1Q14331 258 aaKnown RBP16.33■□□□□ 0.2
MSH6-203ENST00000420813 CSHL1Q14406 222 aa16.33■□□□□ 0.2
MSH6-203ENST00000420813 USP10Q14694 798 aaKnown RBP16.33■□□□□ 0.2
MSH6-203ENST00000420813 STEAP4Q687X5 459 aa16.33■□□□□ 0.2
MSH6-203ENST00000420813 FCRLBQ6BAA4 426 aa16.33■□□□□ 0.2
MSH6-203ENST00000420813 TUBA3EQ6PEY2 450 aa16.33■□□□□ 0.2
MSH6-203ENST00000420813 SBSNQ6UWP8 590 aa16.33■□□□□ 0.2
MSH6-203ENST00000420813 SYDE1Q6ZW31 735 aaPredicted RBP16.33■□□□□ 0.2
MSH6-203ENST00000420813 SLC5A8Q8N695 610 aa16.33■□□□□ 0.2
MSH6-203ENST00000420813 OR5T3Q8NGG3 340 aa16.33■□□□□ 0.2
MSH6-203ENST00000420813 SLC5A11Q8WWX8 675 aa16.33■□□□□ 0.2
MSH6-203ENST00000420813 NEIL2Q969S2 332 aa16.33■□□□□ 0.2
MSH6-203ENST00000420813 MOCOSQ96EN8 888 aa16.33■□□□□ 0.2
MSH6-203ENST00000420813 NPAS2Q99743 824 aa16.33■□□□□ 0.2
MSH6-203ENST00000420813 OLFM1Q99784 485 aa16.33■□□□□ 0.2
MSH6-203ENST00000420813 RBCK1Q9BYM8 510 aa16.33■□□□□ 0.2
MSH6-203ENST00000420813 CLK4Q9HAZ1 481 aaKnown RBP16.33■□□□□ 0.2
MSH6-203ENST00000420813 CHMP2BQ9UQN3 213 aa16.33■□□□□ 0.2
MSH6-203ENST00000420813 KLF2Q9Y5W3 355 aaPredicted RBP16.33■□□□□ 0.2
MSH6-203ENST00000420813 TRGV8A0A0C4DH27 118 aa16.32■□□□□ 0.2
MSH6-203ENST00000420813 PRSS44E7EML9 344 aa16.32■□□□□ 0.2
MSH6-203ENST00000420813 TTI1O43156 1089 aa16.32■□□□□ 0.2
MSH6-203ENST00000420813 CDC123O75794 336 aaPredicted RBP16.32■□□□□ 0.2
MSH6-203ENST00000420813 APCP25054 2843 aa16.32■□□□□ 0.2
MSH6-203ENST00000420813 CD96P40200 585 aa16.32■□□□□ 0.2
MSH6-203ENST00000420813 SCTRP47872 440 aa16.32■□□□□ 0.2
MSH6-203ENST00000420813 SLC26A5P58743 744 aa16.32■□□□□ 0.2
MSH6-203ENST00000420813 PMP22Q01453 160 aa16.32■□□□□ 0.2
MSH6-203ENST00000420813 CACNA1CQ13936 2221 aa16.32■□□□□ 0.2
MSH6-203ENST00000420813 DEFB134Q4QY38 66 aa16.32■□□□□ 0.2
MSH6-203ENST00000420813 CATSPEREQ5SY80 951 aa16.32■□□□□ 0.2
MSH6-203ENST00000420813 TRMT10BQ6PF06 316 aaKnown RBP16.32■□□□□ 0.2
MSH6-203ENST00000420813 ABHD13Q7L211 337 aa16.32■□□□□ 0.2
MSH6-203ENST00000420813 ITLN2Q8WWU7 325 aaPredicted RBP16.32■□□□□ 0.2
MSH6-203ENST00000420813 ANKRD7Q92527 254 aa16.32■□□□□ 0.2
MSH6-203ENST00000420813 TSLPQ969D9 159 aa16.32■□□□□ 0.2
MSH6-203ENST00000420813 MARVELD3Q96A59 401 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms